| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2704 |
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| Symbol | |
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| ID | 5107855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2965793 |
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| End bp | 2966626 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640503948 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001188191 |
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| Protein GI | 146307726 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.379205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0872615 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAGC GTTGTCTGTT GAAGTCCCTG TTGCTGTGGT GCGCGCTTGC GCTGGTGCCC
GCAGGCGCCT TGGCCAGCGG AAAGTGCGAG CGTCTGGTGG CGACCGGCAA TCCCGAGTAT
CCCCCCTACC TGTGGCGCGA TCCGCAGAAC CCGCAGCAGT TGATCGGCGC CAATGCCGAT
CTGCTCAAAC ACCTGGCCAA GGAACTCGGT GTGGTGGTCG ACGTGATCTA CACCGGCCCC
TGGTCGCGAG CCCAGGACGA GGTGCGCACC GGTCGCGTCG ACCTGATCGC GGGTGCCTTC
ATCACCCTGC CGCGCCTGGA GCATATGGAT TATGTGCACC CGGCATTCTT CTTTACCCCC
AGCGTTGTCT GGGTGCGCAA GGGCGAGGCC TTCCCCTATG GCAGCTGGGT CGATCTCAAG
GGCCTGACCG GCGACACGCT GGTCGGCAAC AGCTTTGGCC AGCAGTTCGA TTCCTTCGCC
AAGCAGAACC TGACCCTCGA GGGTGTATCC AGCCTGACCC AGGCGTTCCA GAAGCTTTTG
CTCGGGCGTA CCGACTACGT GCTCTACGAA CGCTATCCTG GGCTGGCGCT GGCCGAAACC
CTGGGTATGG ACGACGATCT GGAGGTGCTG GACCCGCCGA TTTCCAGCGA AGGCCTCTAC
CTCACCCTGT CGCACAATTC GGCGTGCAAC GAGCCCTGGC TGCGTGGCCA GCTGGCGCGG
AAAATGACAG AACTGGTCGC CGCCGGGCTG CCGGAGCAGT TCCTGCAACG CAACCTGGAA
CTGTGGAAGG CGCAGCAGAT GCAGCCTGAC CCGGTTGGCG ACGTCACTCA GTAG
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| Protein sequence | MPERCLLKSL LLWCALALVP AGALASGKCE RLVATGNPEY PPYLWRDPQN PQQLIGANAD
LLKHLAKELG VVVDVIYTGP WSRAQDEVRT GRVDLIAGAF ITLPRLEHMD YVHPAFFFTP
SVVWVRKGEA FPYGSWVDLK GLTGDTLVGN SFGQQFDSFA KQNLTLEGVS SLTQAFQKLL
LGRTDYVLYE RYPGLALAET LGMDDDLEVL DPPISSEGLY LTLSHNSACN EPWLRGQLAR
KMTELVAAGL PEQFLQRNLE LWKAQQMQPD PVGDVTQ
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