| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2696 |
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| Symbol | |
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| ID | 5107847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2957525 |
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| End bp | 2959351 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503940 |
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| Product | long-chain-acyl-CoA synthetase |
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| Protein accession | YP_001188183 |
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| Protein GI | 146307718 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.22324 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAG CCGATCTGAT TTCGCCCTTC CGCTTTCTGG CCCACCTGCC GCAGCACCTG
CCACGCGTGC CACGTATGCT GCGCGGCCTG TACTACGCCG GCATCCGCAA CCGCGAGAAG
AACCTTTCGC TGGCCTGGGC CCTGCAATGC GCCGCCGAAC GCCATCCCGA GCGCCCGGCA
CTGATGGATG AAAACCGCCA GCTCAGCTAT CGCGCCTTCA ATGCCTGGGC CAACCGCCTG
GCCTGGGCGT TCAAGGCCGA GGGGGTCGGC CATGGCGACG TGGTGGCGGT GATGCTGGAG
AACCGCCTGG AGCTGCTGGC GATCCTCGCC GCCCTGAGCA AGCTCGGCGC CGTGGGCGCG
CTGATCAACA CCACCCAGCG CGGCAAGGTG CTGGCGCACA GCTTCAACCT GGTCGAACCC
GGCTTTCTGG TGATCGGCGA AGAACTGCTC GGCGCCTTCG AGGAAATCGC CGCGCAGCTG
CACAGTCAGC AGGCCAAACG CTACTGGATC GCTGACCAGG ACTGCCTGGG CGATACCGGC
CAGGCGCCAG ATGGCTGGCT CAACCTGATG CACCTGGCCG CCGGCCAGGC ACAGGACAAC
CCGCCGGACA GCCAGCGCGT ACGCATGAAG GATGCCTGCT TCCTGATCTA CACCTCCGGC
ACCACCGGCC TGCCCAAGGC CTCGATCATG AGTCATGGCA AGTGGATCAA GGCCTATGGC
GGCTTCGGCC ATTCCGGCCT GACCCTGAAC GAGCACGACG TGCTCTACCT CACCCTGCCC
TGCTACCACA ACAACGCCGT CACCGTATGC TGGAGCGCGG CCCTGGCCGG CGGCGCGGCC
ATCGCCCTGC GCCGCAAGTT CTCCGCCAGC GCCTTCTGGA GCGACGTGGC GCGTTACCAG
GCCACCTGCT TCGGTTACAT CGGTGAACTG TGCCGCTACC TGCTCAACCA GCCCGTGCAA
CCGGCGGAAC AGGGCAACAG CCTGCGCTGC ATGATCGGCA ACGGCCTGCG CCCGTCGATC
TGGGCCGAGT TCAAGCAGCG CTTCGGCGTC GAGCAGATCA CCGAGTTCTA TGCCTCCAGC
GAAGGCAATA TCGGCTTCAC CAACGTCTTC AACTTCGACA ATACGGTCGG TTACACCCCG
GCGACCTACG CCATCGTCCG TTATGACCTA GAGAACGACC GCCCCGTGCG CGGCAAGAAG
GGCTTTCTGC AAAAGGCCGA CAAGGGCGAA GCCGGCCTGC TGATCAGCGA AATCAGCGCC
AAGTGGCCGT TCGACGGCTA CACAGATCCG GCCAAGAGCG AGGCGGCGAT CCTGCGCGAC
GTGTTCAAGA AGGGCGACGC CTGGTTCAAC ACCGGCGACC TGATGCGCGA CATCGGCTGC
AAGCACGCGC AGTTCGTCGA CCGCCTCGGC GACACCTTCC GCTGGAAGGG CGAGAACGTC
TCCACTACCG AGGTGGAAAA CGTGCTCGGC GCCTTCCCCG GGGTGGAAGA TGCGGTGGTC
TACGGTGTGG AGATTCCCGG CACCAATGGC CGCTGCGGCA TGGCTGCGCT GCGCCTGGCG
TCTGGTTATG CGCTGGATGG CACAGCGCTG GCCGCTCACC TCGATGCCGA ACTGCCCGCC
TACGCCGCAC CGCTGTTCGT CCGCCTGCTC GGCGAAGTCG AGACCACCGG CACCTTCAAG
TACAAGAAAA CCGACCTCAA GCAGGCCGGC TACGACCCGG GCAAGGTCGA TGGTCCTCTC
TACGTGCGCC TGCCCGGCTC GGACAGCTTC CAGCCGCTAA GTCGTGAAAC CCATGCGGCC
ATCGAGCAGC AGCGTTACCG CTTTTGA
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| Protein sequence | MSQADLISPF RFLAHLPQHL PRVPRMLRGL YYAGIRNREK NLSLAWALQC AAERHPERPA
LMDENRQLSY RAFNAWANRL AWAFKAEGVG HGDVVAVMLE NRLELLAILA ALSKLGAVGA
LINTTQRGKV LAHSFNLVEP GFLVIGEELL GAFEEIAAQL HSQQAKRYWI ADQDCLGDTG
QAPDGWLNLM HLAAGQAQDN PPDSQRVRMK DACFLIYTSG TTGLPKASIM SHGKWIKAYG
GFGHSGLTLN EHDVLYLTLP CYHNNAVTVC WSAALAGGAA IALRRKFSAS AFWSDVARYQ
ATCFGYIGEL CRYLLNQPVQ PAEQGNSLRC MIGNGLRPSI WAEFKQRFGV EQITEFYASS
EGNIGFTNVF NFDNTVGYTP ATYAIVRYDL ENDRPVRGKK GFLQKADKGE AGLLISEISA
KWPFDGYTDP AKSEAAILRD VFKKGDAWFN TGDLMRDIGC KHAQFVDRLG DTFRWKGENV
STTEVENVLG AFPGVEDAVV YGVEIPGTNG RCGMAALRLA SGYALDGTAL AAHLDAELPA
YAAPLFVRLL GEVETTGTFK YKKTDLKQAG YDPGKVDGPL YVRLPGSDSF QPLSRETHAA
IEQQRYRF
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