| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2679 |
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| Symbol | |
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| ID | 5107830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2939018 |
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| End bp | 2939911 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503923 |
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| Product | bile acid:sodium symporter |
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| Protein accession | YP_001188166 |
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| Protein GI | 146307701 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0385] Predicted Na+-dependent transporter |
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| TIGRFAM ID | [TIGR00841] bile acid transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.401934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.860091 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCG ATCCCTTGCT GACGTTTTTC CTTCCCGCCG CGCTGGGCAT CATCATGCTC
GGCCTCGGCC TGTCGCTGAC CCTGGCCGAT TTCGCCCGGG TGGTGAAATT CCCCAAACCC
GTGCTGATCG GCCTGGCCTG CCAGCTGTTG CTGCTGCCGC TGGCCTGCTT CTTCCTGGCC
AAGGCCTTCG GCCTGGCACC GGCGCTGGCC GTCGGCCTGA TGCTGCTGGC CGCCTCGCCG
GGCGGCACCA CGGCCAACCT GTACAGCCAC CTGGCCCATG GCGACGTGGC GCTGAACATC
ACCCTGACCG CGGTGAATTC GGTGATCGCG ATTCTGACCA TGCCGCTGAT CGTCAACCTG
TCGCTGATGT ACTTCATGGC GGACGATCAG GCCATACCGC TGCAGTTCGC CAAGGTGGTG
CAGGTGTTCG CCATCGTTCT CGGCCCGGTG GCCATCGGCA TGTGGCTGCG CAGCCGCTTT
CCCGGTTTCG CCGAGCGCAT GCAGAAACCG GTGAAGATCG TTTCGGCGCT GTTCCTGTTG
CTGATCATCC TGCTGGCGGT GGCCAAGGAC TGGCGCACCT TCGTCGATTA CGCGCCGTCG
GTCGGCGGCG CGGCGCTGGC CTTCAACCTG CTGAGCATGG CGGTGGGCTA CTGCGTACCC
AGGCTGCTCA AGCTCAATCT GCGCCAGGCG ATCGCCATCG CCATGGAGAT CGGCATCCAC
AACGGCACCC TGGCCATCGC CCTGGCGCTC AGCCCGGCGC TGCTGAACAA CCCGACCATG
GCCATTCCCG CAGCCATCTA CAGCCTGATC ATGTTCATCA CGGCGGCGCT GTTCGGCCTG
TGGGTCAACC GCGTGCATGG CGCAGAACTG GCCGAGCCGG CGCCCGGACG GTAG
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| Protein sequence | MTADPLLTFF LPAALGIIML GLGLSLTLAD FARVVKFPKP VLIGLACQLL LLPLACFFLA
KAFGLAPALA VGLMLLAASP GGTTANLYSH LAHGDVALNI TLTAVNSVIA ILTMPLIVNL
SLMYFMADDQ AIPLQFAKVV QVFAIVLGPV AIGMWLRSRF PGFAERMQKP VKIVSALFLL
LIILLAVAKD WRTFVDYAPS VGGAALAFNL LSMAVGYCVP RLLKLNLRQA IAIAMEIGIH
NGTLAIALAL SPALLNNPTM AIPAAIYSLI MFITAALFGL WVNRVHGAEL AEPAPGR
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