Gene Pmen_2593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2593 
Symbol 
ID5107903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2857602 
End bp2858411 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content67% 
IMG OID640503837 
Producthypothetical protein 
Protein accessionYP_001188081 
Protein GI146307616 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.572119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.592044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGCAC TGTTTCTTGC GCTGCTGGTC ATGAGCGCGA CGGCGCAGGC CGCGCAGCTC 
GAGGTGCAAC TGAGCGGCGG GCAACGCAGC TGGAGCAGCA GCGAATTGCT CGACCATCCG
CAGGCACGCG ACATCGATAT AGACGAAGAC GTGAGCTACA AGCGGCCCAT GCGTTACCGC
GCGGTGCCCA TAAGCACCCT GCTGGACGGC GTCAGCGCGG GCGACCACTT GCAGGCCGTG
GCCCTGGACG GTTTTGCCGC CGAACTGCCG GCCGCCACCC TGCTGGCCCG CGAGGGTGCC
AAGGCCTGGC TGGCCATCGA GGACCCGCAG CATCCGTGGC CACCGCTGGC CAAGGGCAAG
CCCAGCGCCG GTCCCTTCTA TCTGGTCTGG ACCGATCCGG CCGCCAGCCA GATCGGCCCG
GAGCAGTGGC CCTTCCAGGT CGCCCGGATT CGCCAGCTCG CCGCGGTCGA ACAGCGCTTC
CCCGCCCTGC TGCCGGCAGC GGACGCCAGC GCCGAAGTCC GTACCGGCTT TGCCCTGTAT
CAGAAGAACT GCATGGCCTG CCATCGCCTC AATGGCGCGG GTGACTCCGA GTTCGGCCCC
GACCTGAACA TTCCGTACAA CCCGACCGAG TACTTCACCG GCGATTTCCT GCGCCAGTAC
ATCCGCAACC CGCAGAGCCT GCGGCGCTGG CCGCAGGGGC GCATGCCGGG GTTCACCCCG
CAGGTGCTGA GCGAACAGGA GCTGACCGAG CTGATCACCT ATCTGGCGCA CATGGCCGAT
ATTCGGGATC AGCGCAGCGA ACGTCAGTAG
 
Protein sequence
MKALFLALLV MSATAQAAQL EVQLSGGQRS WSSSELLDHP QARDIDIDED VSYKRPMRYR 
AVPISTLLDG VSAGDHLQAV ALDGFAAELP AATLLAREGA KAWLAIEDPQ HPWPPLAKGK
PSAGPFYLVW TDPAASQIGP EQWPFQVARI RQLAAVEQRF PALLPAADAS AEVRTGFALY
QKNCMACHRL NGAGDSEFGP DLNIPYNPTE YFTGDFLRQY IRNPQSLRRW PQGRMPGFTP
QVLSEQELTE LITYLAHMAD IRDQRSERQ