| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2576 |
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| Symbol | |
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| ID | 5108043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2840228 |
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| End bp | 2841091 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640503820 |
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| Product | UspA domain-containing protein |
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| Protein accession | YP_001188064 |
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| Protein GI | 146307599 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.140838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00089263 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAGCGA TCCGTAGCAT TCTGGTGGTG ATGGACCCCC AGCACCCGGA AGGCCTCGCA
CTGAAGCGGG CAAAACTGAT AGCTGGAGTC ACCCAGTCGC GCCTGCATCT GCTGGTTAGC
GACAAGAAAG GCGACCACGG CGCCTGGCTC AACGACCTCA GCAGCAGCCT CGGCGAAGAA
GGCTATGCCG TCTCCACTCA GCAGGCCTGG CACGACAACC TGCATCAGAC CATCATCGCC
GTGCAGCAGG CCGAGGGCTG CGGCCTGGTG ATCAAGCAAC ACCTGCCGGA CAACCCGTTG
AAGAAGGCCA TTCTCACCCC CGAGGACTGG AAGCTGCTGC GCTACTGCCC GGGCCCGGTG
CTCATGGTCA AGACCGACCG GCCATGGACC GGCGGCACCA TTCTCGCGGC CGTGGACGTC
GGCAATGCCG ATGACGAACA CCGCACCCTG CACGCCGGCA TCATCAGCCA CGGCTACGAT
ATCGCCGGCC TGGCCAAGGG CACGCTGCAC GTGATCACCG CTCATCCGAC GCCGATGCTG
TCGGCGGCCG ACCCCACCTT CCAGCTCAAG GAAACCATCG AGGCGCGCTA CCGCGAACAA
TGCCGCAGTT TCCAGGCCGA ATACGACATC CACGACGACC GTCTGCATGT CATCGAGGGC
CCCGCCGACG TGGTGATACC GCATATGGCG CATCAGCTCA GCGCGGTGGT CACCGTCATT
GGCACCGTGG CGCGCACCGG TCTCTCCGGT GCACTGATCG GCAACACCGC CGAAGTCATA
CTCGATGCCC TGGAAAGCGA TGTGCTGGTG CTCAAGCCGG ACGAAGTGAT CGCCCACCTC
GAGGAACTGG TGGCACAGCG CTGA
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| Protein sequence | MQAIRSILVV MDPQHPEGLA LKRAKLIAGV TQSRLHLLVS DKKGDHGAWL NDLSSSLGEE
GYAVSTQQAW HDNLHQTIIA VQQAEGCGLV IKQHLPDNPL KKAILTPEDW KLLRYCPGPV
LMVKTDRPWT GGTILAAVDV GNADDEHRTL HAGIISHGYD IAGLAKGTLH VITAHPTPML
SAADPTFQLK ETIEARYREQ CRSFQAEYDI HDDRLHVIEG PADVVIPHMA HQLSAVVTVI
GTVARTGLSG ALIGNTAEVI LDALESDVLV LKPDEVIAHL EELVAQR
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