Gene Pmen_2496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2496 
Symbol 
ID5107372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2758509 
End bp2758901 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content63% 
IMG OID640503740 
Productmembrane protein-like protein 
Protein accessionYP_001187984 
Protein GI146307519 
COG category[S] Function unknown 
COG ID[COG3686] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.040419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.199912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTC CATTCTGGTG CGTCTTCATC AGCGCCTTGC TGATCTTCAT CGCCAAGGCT 
CCGGTGGCCA AGGCCATGGC CGAGGAGGGC GGCGGTCGTT ACGACAATCA CCATCCACGC
GCGCAACAGG CACGCCTGAC CGGCTTCGGT GCCCGTGCGC TGGCCGCGCA TCTGAACAGC
ATCGAAGCGT TTCCCCTGTT CGCCGTCGGC GTGCTGATGG CGCATGTCAC CCAGACCTAC
GGCTTTCTGA TCGACCTGCT GGCCATCGTC TTCGTGCTCA GCCGGGTGCT GTATCTGCTG
TTCTACTGGT ACGACCTGCA CTGGCAGCGC AGCCTGGTCT GGGTTGTCGG CCTGCTCTGC
AGCCTGTTGC TGATGCTCAG CCCGGCGCTA TGA
 
Protein sequence
MSIPFWCVFI SALLIFIAKA PVAKAMAEEG GGRYDNHHPR AQQARLTGFG ARALAAHLNS 
IEAFPLFAVG VLMAHVTQTY GFLIDLLAIV FVLSRVLYLL FYWYDLHWQR SLVWVVGLLC
SLLLMLSPAL