Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2496 |
Symbol | |
ID | 5107372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2758509 |
End bp | 2758901 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640503740 |
Product | membrane protein-like protein |
Protein accession | YP_001187984 |
Protein GI | 146307519 |
COG category | [S] Function unknown |
COG ID | [COG3686] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.040419 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.199912 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATTC CATTCTGGTG CGTCTTCATC AGCGCCTTGC TGATCTTCAT CGCCAAGGCT CCGGTGGCCA AGGCCATGGC CGAGGAGGGC GGCGGTCGTT ACGACAATCA CCATCCACGC GCGCAACAGG CACGCCTGAC CGGCTTCGGT GCCCGTGCGC TGGCCGCGCA TCTGAACAGC ATCGAAGCGT TTCCCCTGTT CGCCGTCGGC GTGCTGATGG CGCATGTCAC CCAGACCTAC GGCTTTCTGA TCGACCTGCT GGCCATCGTC TTCGTGCTCA GCCGGGTGCT GTATCTGCTG TTCTACTGGT ACGACCTGCA CTGGCAGCGC AGCCTGGTCT GGGTTGTCGG CCTGCTCTGC AGCCTGTTGC TGATGCTCAG CCCGGCGCTA TGA
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Protein sequence | MSIPFWCVFI SALLIFIAKA PVAKAMAEEG GGRYDNHHPR AQQARLTGFG ARALAAHLNS IEAFPLFAVG VLMAHVTQTY GFLIDLLAIV FVLSRVLYLL FYWYDLHWQR SLVWVVGLLC SLLLMLSPAL
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