| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2494 |
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| Symbol | |
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| ID | 5107370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2757532 |
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| End bp | 2758011 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503738 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001187982 |
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| Protein GI | 146307517 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0172407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.149006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGAAA ACACCATCCT CGAGCGCGCC CAGCGCTTTC TTTCTGCCCT GCGCCATTGC
CAGGTGCTGG GCATGAGCGT GCAGGGGGCC GACAGTCGCG GCCTGACCCT GCGTCTGCCC
TATGCCGCGC ACATCGTCGG CAACCCGGAT ACCGGGGTGA TCCACGGTGG CGCCATCACC
ACGCTGATGG ACACCACCTG CGGCATCTCC ACGGTCTGCG TGCTGCCGGA GTTCGAGATC
TGCCCGACCC TGGATCTGCG CATCGACTAC ATGCACCCGG CCGAGCCCGG CAAGGATGTG
TTCGGCTTCG CCGAGTGCTA CCGCGTCACC CCCAACGTGA TCTTCACCCG CGGCTATGCC
TATCAGGACG ATCCCGAGCA GCCGATCGCC CATGTGGTTG GGACCTTCAT GCGCATGGGC
AAGGCAGCGC AGGGCGCCGG TGGGCTCAAG CAGAACATTC AGCAGGGCGG TGCGGCATGA
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| Protein sequence | MSENTILERA QRFLSALRHC QVLGMSVQGA DSRGLTLRLP YAAHIVGNPD TGVIHGGAIT
TLMDTTCGIS TVCVLPEFEI CPTLDLRIDY MHPAEPGKDV FGFAECYRVT PNVIFTRGYA
YQDDPEQPIA HVVGTFMRMG KAAQGAGGLK QNIQQGGAA
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