| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2462 |
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| Symbol | |
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| ID | 5107338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2726596 |
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| End bp | 2727399 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503706 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001187950 |
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| Protein GI | 146307485 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.177963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCAGA TCACTCATAT CCAGAGCAGC CTGCCCGGCG TTCGTCTGAT CGACGCGCAG
TACAGCCGCT TCGCCTTTCC CCGGCACTTT CACCTGGAGT ACCACGTCGG CCTGCTGATC
CAGGGGCAGC ATCGCTACGC CTATGGCGGC GAGCGTCGGC ATGTCGGGGC AGGGGACGTG
CTGCTGATGG CGCCGGAAGG GATTCATGAC GGCGCCTGCC TGGAGGGGCA GAGCTATCGC
ATCCGGGTGA TGGCCTTCGA TCCCTTCTGG CTGGACGAGG CCAGTCGTAC CCTGAGTGAC
GGGCGTCAGG GCGCACCGAG ACTGACCTGC AGCAGTTTGC GCCATCCCGT GCTGTCGCAG
CATCTGCAGC GTTTTCATGC GGCGATGTTG GGCGGGTCAC GTCTGGCGCA GGAGGAATCT
CTCTGGCAGG CGCTGGCCCA TCTGCTGGAG ATGGGCTCGA CCTTGCGCGT CAGCGAGGCG
GATCGGGTCT TCGACCCGCG CACCTGGCAG CGCCTGCGCG ACTGGCTGGA AAGCCGTCTG
GACGCTCCGC CCTCGCTGGA GGAGATCGCC ACCTTCTGCG CCATGAGCCC CTGGCAGGCA
TTGCGCCGCT TCCGCCAGCA CACCGGCTTG CCGCCGCATC AGTGGCTCAC CCAGCTGCGC
CTGCAGCGGG CGTTGCCGCT GGTACTGGCA GGGGAGCCCC TGAGCGAGAT CGCACTGCGC
CTGGGGTTCT ATGACCAGGC GCATTTTTCC CGGCTGTTCC GCCGCACCTA CGGTCTGCCT
CCGGCGCGCC TGCGCCAGGG CTGA
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| Protein sequence | MDQITHIQSS LPGVRLIDAQ YSRFAFPRHF HLEYHVGLLI QGQHRYAYGG ERRHVGAGDV
LLMAPEGIHD GACLEGQSYR IRVMAFDPFW LDEASRTLSD GRQGAPRLTC SSLRHPVLSQ
HLQRFHAAML GGSRLAQEES LWQALAHLLE MGSTLRVSEA DRVFDPRTWQ RLRDWLESRL
DAPPSLEEIA TFCAMSPWQA LRRFRQHTGL PPHQWLTQLR LQRALPLVLA GEPLSEIALR
LGFYDQAHFS RLFRRTYGLP PARLRQG
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