| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2447 |
|---|
| Symbol | |
|---|
| ID | 5107323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 2710945 |
|---|
| End bp | 2711721 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640503691 |
|---|
| Product | CHAD domain-containing protein |
|---|
| Protein accession | YP_001187935 |
|---|
| Protein GI | 146307470 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5607] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0419057 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCATGA GCAGTTTGGC CGAACAGATC CTGGCACGCG TGCTGGCCTT GCAGGTCCGT
CTGTATGCCT GTCAGGCGCG CCTGGCCGCT GTGACCGATG CCGAAGCCCT GCACGATCTG
CGTATCGCCC TGCGCCAGCT GCGCAGTCTG TTGCGGCCGT TGCGCGGTCT GCCGAGCGTC
GACGCGCTGG AGCAGGGCGC GGCGGTGCTG GGACGGCTGA GCGGCCCTTT GCGCGACCGC
GAGGTGCTGA TCGGCGAGCT GCAGCGTCTG GGGTTGCCCC ACCTGGCTCC GCTCGATGCG
GCGCAGCACG CAGCGGGATA CGCGGCCATC GCCAGCAGCC GCGAGCTGGC CGAGCTGCTG
CTGTTGCTCG ATGCCTGGCC GACGAACTGG CGTCAGGCCG CCGTGCAGGG GCAGTTGCGC
GGGATGGACA AGCGCATCCG TCGCCGCCTG CGCCGCCAGC AGCGCCATCT GGCCGCTGCG
CTGCGCGATC CGGCGCATGA CCGGCATCGC CTGCGGCTGT TGATCAAGCG CGTGCGTTAC
GCCGCAGAGA CCTATCCGGC CCATGGCGGT CTGGGCAAGG CCGCGTATGC GCGTCTCAAG
CGTGCGCAAA GCGAGCTGGG CGATTGGCAC GATCATCTGC AGTGGCTGGC GCAGAGCGAA
GCGAGCGAGG CGCTGAAGCC GTGCAGGGAC CATTGGCTGC AGGCCCAGGC AATGGCCGAG
CGCCGCGCGG ACGAGGCCTT GCTGGCGCTG TACGTCGACT TCCCCGTCGA GCAATAA
|
|---|
| Protein sequence | MCMSSLAEQI LARVLALQVR LYACQARLAA VTDAEALHDL RIALRQLRSL LRPLRGLPSV
DALEQGAAVL GRLSGPLRDR EVLIGELQRL GLPHLAPLDA AQHAAGYAAI ASSRELAELL
LLLDAWPTNW RQAAVQGQLR GMDKRIRRRL RRQQRHLAAA LRDPAHDRHR LRLLIKRVRY
AAETYPAHGG LGKAAYARLK RAQSELGDWH DHLQWLAQSE ASEALKPCRD HWLQAQAMAE
RRADEALLAL YVDFPVEQ
|
|---|
| |