| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2446 |
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| Symbol | |
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| ID | 5107322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2710041 |
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| End bp | 2710856 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640503690 |
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| Product | Acyl-CoA thioesterase-like protein |
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| Protein accession | YP_001187934 |
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| Protein GI | 146307469 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1946] Acyl-CoA thioesterase |
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| TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00478158 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATGCG AGGTGTGTAT GACTTTTTCC GAACTGCTCG ACGCGGTGCG CCGTGACCCG
GATGGCGTGG TGATTCCGCC AACCTGGGGG CAGGGCCGGG CAAGCTTTGG CGGCCTGGTG
GCGGCGCTGG CGTTCGAAGC CATGCGCGCC AAGGTGCCGC AAGGGCGTCC GGTGCGCTCG
CTGGCCATCA CCTTCGTCGG CCCGGTGGCC GCCGAGGTGC CGGTGAGCTT TCAGGCCGAG
GTGCTGCGCG AGGGCAAGGC GGTCAGCCAG ATGTGCCTGC GCGCGGCTCA GGATGGCCAG
GTGGTGACCA TGGTGCAGGG TAGCTTCGGT GCCTCGCGCG ATTCGCTCAT CGACGTGGCG
CCGTTGCCGG CGCCGCAGCT CAAGCCTGCC GAGCAATGCA CCGAGCTGCC CTACGTGCGC
AACGTCACCC CGGAGTTCAC CCGATTTCTG GCCATGCGCT GGGCCCTTGG CGGCATGCCC
TTCACCAACA ACCCGTCGCG GCAGATGGGC GGCTGGGTGC GCCTACGTGG CGAGAACGAG
GTGCAGGCAT TGAGCGAGGC GCATCTGCTG GCGCTGGTCG ATGCCTGGCC GCCGGCGGTA
CTGCCGCATC TGAAGAGCCC GGCACCGGGT AGCTCGCTGA CCTGGACCAT CGAATTCGTG
CAGCCGCTGC AAAGCCTGAA CACCGAGCAC TGGTGCCTGT ACCGCGCGGA GATCGAGCAC
GCCCGCGATG GCTACGGACA CGTGGCGGCG GCGCTGTGGA GTCCGAGTGG CGAACTGATC
GCTCTGAGCC GGCAGACCGT GACCGTGTTT GCCTGA
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| Protein sequence | MECEVCMTFS ELLDAVRRDP DGVVIPPTWG QGRASFGGLV AALAFEAMRA KVPQGRPVRS
LAITFVGPVA AEVPVSFQAE VLREGKAVSQ MCLRAAQDGQ VVTMVQGSFG ASRDSLIDVA
PLPAPQLKPA EQCTELPYVR NVTPEFTRFL AMRWALGGMP FTNNPSRQMG GWVRLRGENE
VQALSEAHLL ALVDAWPPAV LPHLKSPAPG SSLTWTIEFV QPLQSLNTEH WCLYRAEIEH
ARDGYGHVAA ALWSPSGELI ALSRQTVTVF A
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