| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2443 |
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| Symbol | |
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| ID | 5107319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2707191 |
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| End bp | 2708018 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503687 |
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| Product | Sec-independent protein translocase TatD |
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| Protein accession | YP_001187931 |
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| Protein GI | 146307466 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0190314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTCA TCGATATAGC CGTCAATCTC ACCCACCCCA GCCTCGCCGC GCAGGCCGAG
GCGCTGCTCG AGCGCGCCTA TGCGGCGGGC GTCTGTCAGC TGGTGCTGAC CGGCACCAGT
CTGACCGAAA GCGAAGCGAG CCTCGCACTT TGCCGACAGC TGGATGCCCG TGGTGGGCGC
CTGTTCAGCA CCGCCGGGGT GCACCCTCAC GATGCCAGCA GCTGGAACGG CGCCAGCAGC
GCCGCCCTCA AAGCCTTGCT GAGCGAGCCG CAAGTGCGAG CCGTTGGCGA GTGCGGGCTG
GATTTCGATC GCGATTTCTC ACCGCGCCCG GCTCAGGAAA AGGCTCTGGA GGAACAGCTG
GCACTGGCCG CCGAGCTGCA GATGCCGGTG TTCCTGCATG AGCGCGAGGC CAGCCAGCGG
TTGCTGGAGA TTCTGCGCGA CTATCGTGAC CGGTTGCCGG CGGCGGTGGT GCACTGCTTC
ACCGGCGAAC GACGCGCCTT GTATGCCTAC CTGGATCTCG ACCTGCATAT CGGCATCACC
GGCTGGGTGT GCGACGAGCG CCGCGGCACC CATCTACATC CTCTGCTCAA GGACATCCCC
GGCGAGCGGC TGATGCTGGA AACCGACGCC CCCTTCCTGC TGCCGCGCAG CCTACGGCCG
AAGCCCAAGA GCGGGCGCAA CGAACCGGCC TATCTCGTCG AGGTGCTGCG CGAGGTGGCC
CTGCATCGCG GGCAGAGCGC CGAACAGCTG GCCAGCTCGA CCACCGCCTG CGCCCGCGCA
TTCTTCGCGC TGCCGACCAT ACTGGATGAC GCCAGCCCGG AGTGTTGA
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| Protein sequence | MQLIDIAVNL THPSLAAQAE ALLERAYAAG VCQLVLTGTS LTESEASLAL CRQLDARGGR
LFSTAGVHPH DASSWNGASS AALKALLSEP QVRAVGECGL DFDRDFSPRP AQEKALEEQL
ALAAELQMPV FLHEREASQR LLEILRDYRD RLPAAVVHCF TGERRALYAY LDLDLHIGIT
GWVCDERRGT HLHPLLKDIP GERLMLETDA PFLLPRSLRP KPKSGRNEPA YLVEVLREVA
LHRGQSAEQL ASSTTACARA FFALPTILDD ASPEC
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