| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2434 |
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| Symbol | |
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| ID | 5107310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2696112 |
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| End bp | 2697839 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503678 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_001187922 |
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| Protein GI | 146307457 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.208591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.972609 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTAT ATGGACATAT TCGGCGCAGC CTGGTGCTGC TGCTGATCAG CACCGGGGCC
TTTGCGGCCG GCGAGCTGGA CGTGCGAATC ACCCCGGCCA ATTCCGCCCT CAGAACCAAT
ATCGAAGGTT ACGTCGGGAG TCTGGAGGGG CGCGATCTGC AGTCGTTGCG GCGCCTGCGG
CGCATCGCCG AGAGCGAGGC GAACAAGGCC GCGCAGGCGC TGGGCTATTA CCAGGCGCGC
ATTCGCAGCC GCATCGAGGA AGGCGAGACG CCGCGTCTGA TACTGGAGGT CGAGCCCGGC
GAGCGTGTGC GCCTGCGCAA CGTGAACATT CGTGTCGAGG GGCCGGCCAG CGAGCTGGCG
GCCTTCCGTC TGCCCACCGC GACCCGCCTG CAGCCCGGCT CGGTCCTCAA TCACGGGCGC
TACGAGGATG CCAAACGGCT GATCCAGAAT CAGGCGTCGC GCTACGGCTT CTTCGATGGG
CGTTTTACCC GGCAGAGCCT GCAGGTCGAT CCGGCAGCCG GGGTCGCCGA TATCGACCTG
GTCTACCTCA GCGGGCCGCG CTACCGCCTC GGCGATATCG CCTTCAGCGG CGACTTTCCC
TTCGATGAAG ATCTGCTGCG GCGCATGGTG CCGTTCAAGG CCGATACCCC CTATGACTCC
GAGCTGATCG CCGAGCTGTA CCAGGCGCTG CAGTCCAGCG GTTACTTCGA ATCGGTACGG
GTCGACGCCA TTCCCACCCA GGCCGATCAG CAGCGCATTC CCGTCGCGGT CGATTTGCAG
GTGCGCCAGC CACGCACCAT GGGCCTCGGC CTGGGCTTTT CCACCGATGT CGGGCCGCGC
CTGCGTGCCA ACTGGACGCG CCACTGGCGC AATCCGCAGG GCCACAGCTA CGGCGTGGAG
AGCGAGCTGT CGGCGCCGCG GCAAAACCTC GGCCTGTGGT ACGACATCCC GGGTGATCCG
CCCCTGACCG ACAAGCTGCG CCTGGCCGGT GGCTATCAGT ACGAGGAGCT GGCCAGCAAG
GACAGCCTCA GCCGCCTGCT CACCGTCGGC CCGGAATGGC ACAGCCGGCG TGCCGGTGGC
TGGCAGCGGG TACTGTCGGT GAAATGGCAG CGCGAGGAAT ACCGCCTGGG CGATGATTCG
GGATTGAGTA CGCTGTTGAT GCCGGGGGTC AGCTATTCGC TGCTGCGCAG CGACAATCGC
CTCGATCCCA ACCAGGGCTA TCGCGTGCAG TTCGACCTCT CCGGCGCGGT GGATGGCCTG
CTGTCCGACG CCAACGTGCT GCACGGCAAC GTCATGCTCA AGGGGCTGAC CACCTTGCTG
GACAACCACC GAGTGCTTGG TCGCGTGCAG TTCGGCGGCA CCGAAACCAA CAGTTTTTCC
GGTGTGCCGC CATCGCTGCG CTTCTTCGCC GGTGGCGACC AGAGCGTGCG GGGCTACGAC
TATCAGAGCC TGTCGCCGCA GAACAATCGC GGCGACAGGG TTGGCGGCCG CTACCTGTTC
GCCGCCAGCG TCGAATACCA GTACAGCCTG ACCGACAAGT GGCGCCTGGC GACCTTCGTC
GATCAGGGTA ACTCGTTCAA TTCCCTGGAG TTCCCCACGC TCAAGACCGG GGTGGGCTTC
GGCGTGCGCT GGGTCTCGCC GGTCGGCCCG CTGCGCCTGG ACCTGGCCCA TGCGCTGGAT
GATGACGGCG GCGTGCGCCT GCACTTTTCC ATGGGGCCGG AACTGTGA
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| Protein sequence | MSVYGHIRRS LVLLLISTGA FAAGELDVRI TPANSALRTN IEGYVGSLEG RDLQSLRRLR
RIAESEANKA AQALGYYQAR IRSRIEEGET PRLILEVEPG ERVRLRNVNI RVEGPASELA
AFRLPTATRL QPGSVLNHGR YEDAKRLIQN QASRYGFFDG RFTRQSLQVD PAAGVADIDL
VYLSGPRYRL GDIAFSGDFP FDEDLLRRMV PFKADTPYDS ELIAELYQAL QSSGYFESVR
VDAIPTQADQ QRIPVAVDLQ VRQPRTMGLG LGFSTDVGPR LRANWTRHWR NPQGHSYGVE
SELSAPRQNL GLWYDIPGDP PLTDKLRLAG GYQYEELASK DSLSRLLTVG PEWHSRRAGG
WQRVLSVKWQ REEYRLGDDS GLSTLLMPGV SYSLLRSDNR LDPNQGYRVQ FDLSGAVDGL
LSDANVLHGN VMLKGLTTLL DNHRVLGRVQ FGGTETNSFS GVPPSLRFFA GGDQSVRGYD
YQSLSPQNNR GDRVGGRYLF AASVEYQYSL TDKWRLATFV DQGNSFNSLE FPTLKTGVGF
GVRWVSPVGP LRLDLAHALD DDGGVRLHFS MGPEL
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