| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2422 |
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| Symbol | |
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| ID | 5108262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2672392 |
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| End bp | 2674242 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503666 |
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| Product | NADH dehydrogenase subunit L |
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| Protein accession | YP_001187910 |
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| Protein GI | 146307445 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.886749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.161461 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTTC TAGCCCTGAC CCTGTTCTTC CCGCTGCTTG GCTGGCTGCT GCTGGCCTTC
TCGCGCGGAC GCCTGACGGA AAACACCAGC GCGCTGATCG GCGTCGGCTC CATCGGCCTG
GCGGCGGCCA GCGCTGCCTG GGTGACTGCC GACTTCCTCG GCAACCCGCC GGCCGGCGGC
GCCTACAGCC TGACCCTGTG GCAGTGGATG AGCGTCGAAG GCCTGGCGCC GAGCTTCACC
CTGTATCTCG ACGGACTGTC GCTGACCATG CTGGGCGTGG TCACCGGCGT GGGTTTTCTG
ATCCACCTGT TCGCCAGCTG GTACATGCGC GGCGAGGAAG GCTATTCGCG CTTCTTCGCC
TACACCAACC TGTTCATCTT CAGCATGTTG CTGCTGGTAC TCGGCGACAA CCTGCTGGTG
CTGTTCTTCG GCTGGGAAGG CGTGGGCCTG TGCTCGTACC TCCTGATCGG CTTCTACTAC
AAGCACGTGC CCAATGGTAA CGCGGCGCTC AAGGCCTTCA TCGTCACCCG CGTGGGCGAC
GTGTTCCTGA TGATCGGCCT GTTCCTGCTG TTCCTCAACC TCGGCACCCT GAACATCCAG
GAGCTGATGA CGCTGGCGCC GCAGCAGTAC GCGGCCGGCG ACGCCTGGCT GTGGCTGGCC
ACCCTGATGC TGCTGGGCGG CGCGGTCGGT AAATCTGCCC AGCTGCCGCT GCAGACCTGG
CTGGCCGACG CCATGGCCGG CCCGACCCCG GTCTCGGCGC TGATCCACGC GGCGACCATG
GTCACTGCCG GCGTTTACCT GATCGCCCGT ACCCACGGCC TGTTCCTGCT GACCCCGGAG
ATTCTCGAGC TGGTCGGCAT CGTCGGCGGC GTGACCCTGG TGCTGGCCGG CTTCGCCGCC
CTGGTGCAGA CCGACATCAA GCGCATCCTC GCCTACTCGA CCATGAGCCA GATCGGCTAC
ATGTTCCTCG CCTTGGGCGT CGGCGCCTGG GATGCGGCGA TCTTCCACCT GATGACCCAT
GCCTTCTTCA AGGCCCTGCT GTTCCTCGCC TCCGGTGCAG TGATCCACGC CTGCCACCAC
GAGCAGAACA TCTTCAGGAT GGGCGGTCTG TGGAGGAAGC TGCCGCTGGC CTACGCCAGC
TTCGTCGTCG GCGGTGCGGC CCTGGCCGCC CTGCCGCTGC TCACCGCCGG TTTCTACTCC
AAGGACGAGA TTCTCTGGGA AGCCTTCGCC AGCGGCCACC GCGACCTGCT CTACGCGGGG
CTGGCCGGTG CCTTCCTGAC CTCGATCTAC ACCTTCCGCC TGATCTTCAT CGCCTTCCAC
GGCGAGCAGA AGACCGAAGC GCATGCCGGC CATGGCCTCG CCCACAACCT GCCGCTGCTG
GTGCTGATCG TGCTGTCCAC CTTCATCGGC GCCTGGATCA CCCCGCCACT GGCCGGCGTG
CTGCCGCAAA GCGCAGGCCA TGCCGGCGGC GAAGCCAAAC ACAGCCTGGA ACTGCTCTCC
GGCCTGATCG CGGTAAGCGG CATCGTCCTC GCCGCCCTGC TCTTCCTCGG CCAGCGCCGC
GTTGCATCGG CCGTCGCGCA GAGTGCGCCG GGTCGCCTGC TGAGCGCGCT ATGGTTCGCC
GCCTGGGGTT TCGACTGGCT CTACGACAAG CTGTTCGTGC GCCCCTACCT GCTGCTCTGC
CGCCTGCTGC AGCGCGACCC CATCGACCGC GGCATCCGCG TGATTCCGCT GCTGGCCCGC
GGCGGCAACG CCCTGCTGGC CAGCAGTCAG ACCGGCCAGG TGCGCTGGTA CGCCGCCTCG
GTCGCCGGCG GTGCCGTACT GGTGCTCGCC GTCATCCTCT TTCTGAGTTA A
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| Protein sequence | MNLLALTLFF PLLGWLLLAF SRGRLTENTS ALIGVGSIGL AAASAAWVTA DFLGNPPAGG
AYSLTLWQWM SVEGLAPSFT LYLDGLSLTM LGVVTGVGFL IHLFASWYMR GEEGYSRFFA
YTNLFIFSML LLVLGDNLLV LFFGWEGVGL CSYLLIGFYY KHVPNGNAAL KAFIVTRVGD
VFLMIGLFLL FLNLGTLNIQ ELMTLAPQQY AAGDAWLWLA TLMLLGGAVG KSAQLPLQTW
LADAMAGPTP VSALIHAATM VTAGVYLIAR THGLFLLTPE ILELVGIVGG VTLVLAGFAA
LVQTDIKRIL AYSTMSQIGY MFLALGVGAW DAAIFHLMTH AFFKALLFLA SGAVIHACHH
EQNIFRMGGL WRKLPLAYAS FVVGGAALAA LPLLTAGFYS KDEILWEAFA SGHRDLLYAG
LAGAFLTSIY TFRLIFIAFH GEQKTEAHAG HGLAHNLPLL VLIVLSTFIG AWITPPLAGV
LPQSAGHAGG EAKHSLELLS GLIAVSGIVL AALLFLGQRR VASAVAQSAP GRLLSALWFA
AWGFDWLYDK LFVRPYLLLC RLLQRDPIDR GIRVIPLLAR GGNALLASSQ TGQVRWYAAS
VAGGAVLVLA VILFLS
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