| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2406 |
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| Symbol | |
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| ID | 5108246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2653864 |
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| End bp | 2654673 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503650 |
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| Product | NolW domain-containing protein |
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| Protein accession | YP_001187894 |
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| Protein GI | 146307429 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.138617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTGC GCACGCTGTT CGCCGCCCTG CTTCTCGGCC TGTGCCTGCC GCTGCACGCG
GCTACCGAGG TGATTCCGCT GAACTACCGC ACCGCCGACG ATGTGCTTGG CGTGGTGCAG
TCGATGCTCG GCAACGAGGG CAAGGTCAGC GCCTACGGCA ACCAGCTGAT CGTCAATGCC
TCACCCGCCA AGATCGGCGA GATTCGCGTG CTTCTGCAGC AGCTCGACAC CCGCCCTCGC
CGCCTGCTGA TCACGGTCGA AAGCGCCGAC AGCAGCTACC AGAACGATCG CGGCTATCGG
GTCGACGGCA CGCTCAGCGC CGGCAATGCC GAGGTGCAGG TCGGCCGTGG CGAAGTGAAC
GGCCGCGACC AGGTGCGCAT CATTCGTCGC AGCACTGACA GTCGTGGCGG CGGCACCCAG
CAGGTACAGG CCACCGAAGG TTATCCGGCG CTGATCCAGG TCGGCCAGAG CGTGCCGCTG
ACCACCACCA GCACCGGCCC CTACGGGCGG ATCTATCAGG ACACCCAGTA CCGCGACGTC
ACCCGTGGCT TCTACGTAAC GGCCAGCCTC TCCGGCGAAC TGGTGCATGT GGCCATCAGC
AGTCAGCGTG ATCGCGTCAA CAGCAACCGC CCAGATGTGA TCGACGTGCA GAGCACCGAC
ACCCGCGTCA GCGGCCGACT CGGCGAATGG ATCACCCTTG GCGGAGTCAG CGAGGACACC
AGCTCCAGCG GCCGCGACGT GCTGCGTCGG CACACCACCC AGGGCCGCGA AGACATGTCG
CTGCGGATCA AGGTCGAGGC GCTCGACTGA
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| Protein sequence | MTLRTLFAAL LLGLCLPLHA ATEVIPLNYR TADDVLGVVQ SMLGNEGKVS AYGNQLIVNA
SPAKIGEIRV LLQQLDTRPR RLLITVESAD SSYQNDRGYR VDGTLSAGNA EVQVGRGEVN
GRDQVRIIRR STDSRGGGTQ QVQATEGYPA LIQVGQSVPL TTTSTGPYGR IYQDTQYRDV
TRGFYVTASL SGELVHVAIS SQRDRVNSNR PDVIDVQSTD TRVSGRLGEW ITLGGVSEDT
SSSGRDVLRR HTTQGREDMS LRIKVEALD
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