| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2364 |
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| Symbol | |
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| ID | 5108206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2610291 |
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| End bp | 2611085 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640503606 |
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| Product | NLPA lipoprotein |
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| Protein accession | YP_001187854 |
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| Protein GI | 146307389 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
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| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0111009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.00286659 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCAAGA CCCTGAAAAC CCTGACCCTC GCCACTCTGC TCGCCGCCAG CAGCCTGGCG
CTGGCCGAAC CGGCCCTGAA ACTTGGCACC ACCGCCGCCT TCGCCCCGCC GCTGGAAGTG
GCCGTGGCCG AGGCGAAGAA ACAGGGCCTG GAGGTGGAGC TGGTCGAGTT CACCGACTGG
ATCGCGCCCA ACGTCAGCCT GGCCAACGGC GATATCGATG TGAACTACTT CCAGCACATC
CCCTTCCTGG AGAACGCCAA GTCCGAAGGC GGTTATGACC TAGTGCCGGT GGCACGCGGC
GTGCTCAACA ACGTCGGCCT GTACTCGAAA AAACACAAGG ACTTCTCCAC CCTGCCGGAT
GGCGCCAAGG TGGCCATCGC CAACGACCCG ATCAATGGCG GACGAGGCCT GCAACTGCTG
CGCAAGGCCG GGCTGATCGA GCTCAAGCCG GACGTCGGCT ACAAGGCCAC TCTGGAGGAC
ATCACCGCCA ACCCGAAGAA CATCCGCATC ATCGAGCTGG AAGCCGTGCA ACTGGTGCGT
GCCCTGGATG AAGTGGACGT GGCCCAGGGC TACCCGCACT ACATCCGCCT GGCCGGCACC
CATGACCCGG AATCGGCGCT GCTGTTCGAC GGCCTGGACA ACCCCGAGTA CATCATCCAG
TTCGTCACTC AGCCGGGCAA AGCCAAGGAC GCCCGCCTGC TCAAGTTCAT CGACATCTAC
CAGCACTCGC CGGCCGTGCG CACCGCCCTG GACAAGGCCC ACGGCAATCT CTACCAGCCG
GGTTGGGAGA GCTGA
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| Protein sequence | MLKTLKTLTL ATLLAASSLA LAEPALKLGT TAAFAPPLEV AVAEAKKQGL EVELVEFTDW
IAPNVSLANG DIDVNYFQHI PFLENAKSEG GYDLVPVARG VLNNVGLYSK KHKDFSTLPD
GAKVAIANDP INGGRGLQLL RKAGLIELKP DVGYKATLED ITANPKNIRI IELEAVQLVR
ALDEVDVAQG YPHYIRLAGT HDPESALLFD GLDNPEYIIQ FVTQPGKAKD ARLLKFIDIY
QHSPAVRTAL DKAHGNLYQP GWES
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