Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2361 |
Symbol | |
ID | 5108203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2606392 |
End bp | 2607630 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640503603 |
Product | acyl-CoA dehydrogenase type 2 |
Protein accession | YP_001187851 |
Protein GI | 146307386 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00969514 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0011963 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCAGTC CGATTACCCT TGAGGACAGC GACCAGGACG TCGCCCCTTC GCTGTTCCCC GCCGCCATTC TCAGCACCGA CGCCGAAGCC CTGCAGGCTG CACATGCCCT GGCAGAAGCG GCGCAGCTGG AAGTCATCCA GCGCGACCGC GAGCGCCGCC TGCCCTGGGA CCTGGTGGAA CGCTTCACCG CCAGCGGCCT CGGCAGCATC GCCGTGCCGC GCGCCTTCGG TGGCCCGCAG CTGTCCTATG TGACCATCGC CGAGGTGTTT CGCATCATCT CCGCGGTCGA CCCGGCCCTG GGGCAGATTC CGCAGAACCA GTTCGGCCTG CTCGGCGTCC TGCAGGCGGC CGCCAGCCAG GAACAACAGC AGCGCCTGTT CGCCAGCGTG CTGGCCGGCT GGCGCATCGG CAATGGCGGC CCCGAACGGG GCAGCAAGCA CACCCTGGAC ATCCAGGCAC GCCTGGTGCA GCGCGATGGC CGCTGGCTGT TCAGCGGCGA GAAGTTCTAT TCCACCGGTG CCCTCTTCGC CCACTGGATC GCCAGCAAGG CCCTGGACGA TCAGGGCCGG CCGTGGCTGG CCTTTATCCA GCGCGGGCGT GCCGGGCTGC GCGTGGTCAA CGACTGGTCC GGCTTCGGCC AGCGCACCAC CGCCAGCGGC ACCGTGTTGC TGAATGACGT GGAGGTGGAC GAGAACAACC TGATTCCGCT CTGGCCGCTG GCCGACAAGC CGAGCATCCA GGGCGCCTTC TCCCAGTTGA TCCAGGCCGC CATCGATCTG GGCATCGCCG ACGGCGCGCT GCGCGACACC CTGGATTTCG TACGGCACAA GGCTCGCCCT TGGATCGACG CCAAGGTCGA GCGTGCCGGC GATGATCCCT ACGTGATCGC CGATGTCGGC CGCCTGCAGA TTGAACTGCA CGCTGCCGAA GCCCTGCTGC ACAAGGCCGC TCGCGTGCTC GACGAAGTCG CGGCAAGCGC CATCGATGCC GATGCCGCCG CCCGCGCCTC CATCGCAGTG GCAGAAGCCA AGGCGCTGAC CACCGAAATC TCCCTGACCG CCAGCGAGAA GCTGCTGGAA CTGGCCGGCA GCCGCGCCAC CCTGGCCGAG TTCGGCCTCG ACCGGCACTG GCGCAACGCG CGCACCCACA CCCTGCACGA CCCGGTGCGC TGGAAGTACC ACGCCGTCGG TGCCTGGCAC CTCAATCAAC GTCACCCCGC CCGCCACTCC TGGATCTGA
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Protein sequence | MTSPITLEDS DQDVAPSLFP AAILSTDAEA LQAAHALAEA AQLEVIQRDR ERRLPWDLVE RFTASGLGSI AVPRAFGGPQ LSYVTIAEVF RIISAVDPAL GQIPQNQFGL LGVLQAAASQ EQQQRLFASV LAGWRIGNGG PERGSKHTLD IQARLVQRDG RWLFSGEKFY STGALFAHWI ASKALDDQGR PWLAFIQRGR AGLRVVNDWS GFGQRTTASG TVLLNDVEVD ENNLIPLWPL ADKPSIQGAF SQLIQAAIDL GIADGALRDT LDFVRHKARP WIDAKVERAG DDPYVIADVG RLQIELHAAE ALLHKAARVL DEVAASAIDA DAAARASIAV AEAKALTTEI SLTASEKLLE LAGSRATLAE FGLDRHWRNA RTHTLHDPVR WKYHAVGAWH LNQRHPARHS WI
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