| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2343 |
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| Symbol | |
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| ID | 5108578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2587347 |
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| End bp | 2589122 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503585 |
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| Product | ABC transporter related |
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| Protein accession | YP_001187833 |
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| Protein GI | 146307368 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.481071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0107518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCA GCGCCCACGA CGCCCAGCAG GCCCTGCCGG GCAAGCCGCT CGCCTTCCTG
GCGCGCTACG TGCTCAAGCG GCCCTGGCAT TTCGGCGGCA TGTTCCTGCT GATCGCCGGC
GCCGGCAGCT GCGCCGTGGC CGTGCAGTAC GGGATGAAAC TGCTGGTCGA TGCGATGGCC
ACCAACGACC GCCAGCAGGC CGACGTGTGG TTCCCGCTGG GCATCTTCAT CGGCCTGATC
GTGGTGGAAA ACGTGTTCTG GCGTCTGGGC GGATGGCTGG GCTGCCGTAC CGTGGTGGCC
AGTTGCGTGG ACATCCGGGT CGACCTGTTT CGCCACCTGA CCGGCCACCC CATGCGCTAC
TTCGCGCAGC ATTATGCCGG TGCCCTGGGC AATCGCATCT CGGCCACCGG CCAGGCCGCC
GGTGCCATCT ACGGCGGCCT GGCCTGGAAG ATCATGCCGC CCTGCGTGGA TTTCCTCGGC
GCGGTGGTGG TGCTGTTCAC CGTGCATGGG CAGATGGCCT GGGCGCTGAT CGGCTTCGTG
CTGGTGGTCG GCGTGCTGAT CATCTCCTTC GGTATCCGCG GCCGCAGCAA GCACCAGCGT
TTCGCCGCCC AGGCCGCGCG GGTCGGTGGC GAACTGGTGG ACGTGGTCTC CAACGTCTGG
ACGATCAAGG CGTTCTCCGC GCGGGACCGC GAAAGCCAGC GCCTGGCCGA GGAAATCGGT
CTGGAGGCCC GGGCCCAGCG GCGCAGCTGG ATGTACCTGG AAAAAGCCCG GGTGATCCAT
GACATCTGCC TGTCGCTGAT GGCCGGCGGC ATGCTGATCT GGGCGATCCA GCTGTGGCTG
GCCGGCAGCG TCACCGCAGG CGACGTGGTC ATGGTCAGCG CCCTGACCTT CCGTATCCTG
CATGGCTCGC GCGACCTGGC GCTGGCGCTG GTGGACACCA CGCAGCAGAT TGGCTCGATC
GACGACACCC TGAAGATCAT CGTACAGCCG CACGGCCTGG ACGATCCCGA ACCGCAGCTG
GCCCTGTGGC GCGGCGACAT CGAATTTCGC GACGTGTGCT TCGCCTACCC GGACGGGCGC
AAGGTATTCG AGCACTTCAA CCTGCATATT CCGGTCGGGC AGAAGGTCGG CATCGTCGGC
GCCTCCGGGG CCGGCAAATC CACGCTGATC AGCCTGATCC AGCGCCTCGA CGACGTGCAG
CATGGCTGCA TCCTGATCGA CCGTCAGGAC ATCAGCGAAG TCAGCCAGGA CAGCCTGCGC
GCGCGCATGG CCGTGGTACC GCAGGAAACC GCACTGTTCA ATCGCAGCAT TCGCGAGAAC
ATCCGCTACG GCAGACCCGA GGCCAGCGAC GAAGAGGTCA TTGCCGCCGC GCGTCACGCC
TTCTGCGACG AATTCGTGCG CGAACTGCCG CAGGGCTACG ACACCCTGGT CGGTGAACGC
GGCGTGATGC TTTCCGGCGG CCAGCGCCAG CGCCTGGGCA TCGCCCGCGC CTTCCTCAAG
GACGCGCCGA TCTTGGTGCT CGACGAGGCG ACCTCGGCGC TCGATACCCG CTCGGAGGCC
GAGATCCAGA CGGCCTTGGC CGACCTGATG CAGGGCCGCA CGGTGCTGGC CGTTGCGCAT
CGCCTGTCCA CGCTGGCCAG CTTCGACCGC GTGCTGGTGC TGGAGGACGG CCAGATCGTC
GAGGATGGCT CGCCAGAAGA GCTGTGCCTG CAGGGCGGCA TCTTCGCCAC CCTATGGAAC
ACCCAGGCAG CCGGATTCAA AAGCGCCGAG GACTGA
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| Protein sequence | MSSSAHDAQQ ALPGKPLAFL ARYVLKRPWH FGGMFLLIAG AGSCAVAVQY GMKLLVDAMA
TNDRQQADVW FPLGIFIGLI VVENVFWRLG GWLGCRTVVA SCVDIRVDLF RHLTGHPMRY
FAQHYAGALG NRISATGQAA GAIYGGLAWK IMPPCVDFLG AVVVLFTVHG QMAWALIGFV
LVVGVLIISF GIRGRSKHQR FAAQAARVGG ELVDVVSNVW TIKAFSARDR ESQRLAEEIG
LEARAQRRSW MYLEKARVIH DICLSLMAGG MLIWAIQLWL AGSVTAGDVV MVSALTFRIL
HGSRDLALAL VDTTQQIGSI DDTLKIIVQP HGLDDPEPQL ALWRGDIEFR DVCFAYPDGR
KVFEHFNLHI PVGQKVGIVG ASGAGKSTLI SLIQRLDDVQ HGCILIDRQD ISEVSQDSLR
ARMAVVPQET ALFNRSIREN IRYGRPEASD EEVIAAARHA FCDEFVRELP QGYDTLVGER
GVMLSGGQRQ RLGIARAFLK DAPILVLDEA TSALDTRSEA EIQTALADLM QGRTVLAVAH
RLSTLASFDR VLVLEDGQIV EDGSPEELCL QGGIFATLWN TQAAGFKSAE D
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