| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2319 |
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| Symbol | |
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| ID | 5108554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2560409 |
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| End bp | 2560876 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503561 |
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| Product | hypothetical protein |
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| Protein accession | YP_001187809 |
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| Protein GI | 146307344 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3521] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03352] type VI secretion lipoprotein, VC_A0113 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00471412 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00131937 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCAAGGA TATTCTGGGG AGTGCTGGCT CTGCTGTTGA CTGCCTGCGC TTCGGAACCG
CCACCGCCGG TACCTACCGT CGTGCGTCTG CAACTGCAGG CCACTACCGA CCTCAACCCG
TCCGGCAGCG GCCAGCCGGC GCCGGTGCGG GTACGCCTGT ATGAGCTCAA GAGCGGCGCG
ATATTCAGCC GCGCCGACTA TTTCTCCCTG GTGGAGGCCG CCAACGCCAC CCTCGGCAGC
GACCTGGTGG AGCAGGACGA ACTGCTGATC CAGCCCGGCG AACAGCTGAT TCTCGACCGT
ACCCTGGACG AGCAGAGCCG CCTGCTCGGC TTCGTGGTCG CCTACCGCGA CCTGGACGAT
TCGGTGTGGC GGCAACTGGT CAACATCCCG CCGCACCAGA CCAGCATCCT CAACGTCAGC
CTCAGCGCCC GCGCGGTCAG CGCCGTGCCT GCGACACCGG CCAAGTAG
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| Protein sequence | MPRIFWGVLA LLLTACASEP PPPVPTVVRL QLQATTDLNP SGSGQPAPVR VRLYELKSGA
IFSRADYFSL VEAANATLGS DLVEQDELLI QPGEQLILDR TLDEQSRLLG FVVAYRDLDD
SVWRQLVNIP PHQTSILNVS LSARAVSAVP ATPAK
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