Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2302 |
Symbol | |
ID | 5108537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2539501 |
End bp | 2540901 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640503544 |
Product | hypothetical protein |
Protein accession | YP_001187792 |
Protein GI | 146307327 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0000035123 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGATCG CCAGCTTCGT CGACAGCACC TCCGCCACCC CCATTGCGCC ACCGCCCCGG CAAGGCACCT GGCAACGCAC CTATCGCCAG CTGCTGGACG AACCCGTGCC GGGCCATGCC CTGGCGCTGG AGTTTCTCGA GCAATGCCTG GAGCAGGCCC GCGAGCTGCC CTGCGAGCTG CCGTCCCGCG TGGAGGAACT GCCGCAGTGG TCCCGGCAGC ATGCGCAGGC GGTGACCGAA CAGTACGCGG CCTACCTGGC GAGCCGGCGC GCCGGTGCCG AACGGCGCTA CTTTCCGCAT CGCTCCCATG CCCTGCACTT TCTGCGCGCG GTGGCGCCGA CCAAGCTGGT CGACGGCGCC TGGCTCTACG GCACGCTGCC GCACTGGCGC GACGCGCGCA TGCACGCACT GGTGCGTATC TACCTGGAAG AGCTGGGCGA CGGCGTGCCG GCGCAGAACC ACGTGCTGCT GTATCGCCGG CTGCTGCATA CCCAGGGCTG CGACGACCTC GAGGCGCTGG ACGACGGCCT CTATCGCCAG GGGGCGATCC AGCTGGCCCT GGGCCTGTCT TGCGAGCGTT ATCTACCGGA AATCATCGGC TACAACCTGG GTTACGAGCA GCCGCCCCTG CACCTGCTGA TCAGCAGTTT CGAGCTCAAC GAGCTGGGCA TCGATCCCTA CTATTTCCAA CTGCACGTGA CCATCGACAA CAGCGCCACC GGCCATGCCG CCAAGGCCGT GCAGTGCGTG CTGGACAATC TGCCTGTCGT CGGCGACGCC GAGGCGTTCT ACCAGCGCGT GAGAAACGGC TATCGCCTCG GCGAGCTGGG CACGGGCTCG ACCGCGGTGA TCGAAGCCTT CGACCTGCAG CACGAGCTGC TGGCAATGCT GGAGCGCAAG CGCAGCGTGG CCAGCCAGGT GCATTCCGAT TACTGCCGCA TTGGCGGGCG TACGGTCAAC GAATGGCTCG GCGCCGAAGG AGATGTGGCC GGTTTTCTCG ACGCCCTGCA GCAGCATGGC TGGATCAGGC GCGACAGGGA TCCGGCCAAC AGCCGCTTCT GGCGTCTGGT GCAGGGTGAA GGCGCGGCGA TGTTCGGCGT GTTCAGCCCC TACGAGAAGC AATTGCTGCA CGACTGGATC GCCGGCGACT GGAGCCAGGA CGAGCAGACC AACCCCTTCC GCCCGCGGCG CCCTGCCCAG GTTGCACACC TGCCCGGCGC CGCGGCCCAG GGCGGCGAAC TGGACCGCGA ACGGCGCGAG CTGCAGGCGC AGCTGGCAGG GCTCGATCCA GCCGGACGCG AACGTCGCCT GATCGAACTG CTGGCTCCGG CGCACCATGC CTCTGCGGCC GGCCTGGCGG CCACGCGCAG CTTCGCCGCG CTCTTGCAGC GGGCTCACTG A
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Protein sequence | MSIASFVDST SATPIAPPPR QGTWQRTYRQ LLDEPVPGHA LALEFLEQCL EQARELPCEL PSRVEELPQW SRQHAQAVTE QYAAYLASRR AGAERRYFPH RSHALHFLRA VAPTKLVDGA WLYGTLPHWR DARMHALVRI YLEELGDGVP AQNHVLLYRR LLHTQGCDDL EALDDGLYRQ GAIQLALGLS CERYLPEIIG YNLGYEQPPL HLLISSFELN ELGIDPYYFQ LHVTIDNSAT GHAAKAVQCV LDNLPVVGDA EAFYQRVRNG YRLGELGTGS TAVIEAFDLQ HELLAMLERK RSVASQVHSD YCRIGGRTVN EWLGAEGDVA GFLDALQQHG WIRRDRDPAN SRFWRLVQGE GAAMFGVFSP YEKQLLHDWI AGDWSQDEQT NPFRPRRPAQ VAHLPGAAAQ GGELDRERRE LQAQLAGLDP AGRERRLIEL LAPAHHASAA GLAATRSFAA LLQRAH
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