Gene Pmen_2302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2302 
Symbol 
ID5108537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2539501 
End bp2540901 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content68% 
IMG OID640503544 
Producthypothetical protein 
Protein accessionYP_001187792 
Protein GI146307327 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0000035123 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGATCG CCAGCTTCGT CGACAGCACC TCCGCCACCC CCATTGCGCC ACCGCCCCGG 
CAAGGCACCT GGCAACGCAC CTATCGCCAG CTGCTGGACG AACCCGTGCC GGGCCATGCC
CTGGCGCTGG AGTTTCTCGA GCAATGCCTG GAGCAGGCCC GCGAGCTGCC CTGCGAGCTG
CCGTCCCGCG TGGAGGAACT GCCGCAGTGG TCCCGGCAGC ATGCGCAGGC GGTGACCGAA
CAGTACGCGG CCTACCTGGC GAGCCGGCGC GCCGGTGCCG AACGGCGCTA CTTTCCGCAT
CGCTCCCATG CCCTGCACTT TCTGCGCGCG GTGGCGCCGA CCAAGCTGGT CGACGGCGCC
TGGCTCTACG GCACGCTGCC GCACTGGCGC GACGCGCGCA TGCACGCACT GGTGCGTATC
TACCTGGAAG AGCTGGGCGA CGGCGTGCCG GCGCAGAACC ACGTGCTGCT GTATCGCCGG
CTGCTGCATA CCCAGGGCTG CGACGACCTC GAGGCGCTGG ACGACGGCCT CTATCGCCAG
GGGGCGATCC AGCTGGCCCT GGGCCTGTCT TGCGAGCGTT ATCTACCGGA AATCATCGGC
TACAACCTGG GTTACGAGCA GCCGCCCCTG CACCTGCTGA TCAGCAGTTT CGAGCTCAAC
GAGCTGGGCA TCGATCCCTA CTATTTCCAA CTGCACGTGA CCATCGACAA CAGCGCCACC
GGCCATGCCG CCAAGGCCGT GCAGTGCGTG CTGGACAATC TGCCTGTCGT CGGCGACGCC
GAGGCGTTCT ACCAGCGCGT GAGAAACGGC TATCGCCTCG GCGAGCTGGG CACGGGCTCG
ACCGCGGTGA TCGAAGCCTT CGACCTGCAG CACGAGCTGC TGGCAATGCT GGAGCGCAAG
CGCAGCGTGG CCAGCCAGGT GCATTCCGAT TACTGCCGCA TTGGCGGGCG TACGGTCAAC
GAATGGCTCG GCGCCGAAGG AGATGTGGCC GGTTTTCTCG ACGCCCTGCA GCAGCATGGC
TGGATCAGGC GCGACAGGGA TCCGGCCAAC AGCCGCTTCT GGCGTCTGGT GCAGGGTGAA
GGCGCGGCGA TGTTCGGCGT GTTCAGCCCC TACGAGAAGC AATTGCTGCA CGACTGGATC
GCCGGCGACT GGAGCCAGGA CGAGCAGACC AACCCCTTCC GCCCGCGGCG CCCTGCCCAG
GTTGCACACC TGCCCGGCGC CGCGGCCCAG GGCGGCGAAC TGGACCGCGA ACGGCGCGAG
CTGCAGGCGC AGCTGGCAGG GCTCGATCCA GCCGGACGCG AACGTCGCCT GATCGAACTG
CTGGCTCCGG CGCACCATGC CTCTGCGGCC GGCCTGGCGG CCACGCGCAG CTTCGCCGCG
CTCTTGCAGC GGGCTCACTG A
 
Protein sequence
MSIASFVDST SATPIAPPPR QGTWQRTYRQ LLDEPVPGHA LALEFLEQCL EQARELPCEL 
PSRVEELPQW SRQHAQAVTE QYAAYLASRR AGAERRYFPH RSHALHFLRA VAPTKLVDGA
WLYGTLPHWR DARMHALVRI YLEELGDGVP AQNHVLLYRR LLHTQGCDDL EALDDGLYRQ
GAIQLALGLS CERYLPEIIG YNLGYEQPPL HLLISSFELN ELGIDPYYFQ LHVTIDNSAT
GHAAKAVQCV LDNLPVVGDA EAFYQRVRNG YRLGELGTGS TAVIEAFDLQ HELLAMLERK
RSVASQVHSD YCRIGGRTVN EWLGAEGDVA GFLDALQQHG WIRRDRDPAN SRFWRLVQGE
GAAMFGVFSP YEKQLLHDWI AGDWSQDEQT NPFRPRRPAQ VAHLPGAAAQ GGELDRERRE
LQAQLAGLDP AGRERRLIEL LAPAHHASAA GLAATRSFAA LLQRAH