| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2299 |
|---|
| Symbol | |
|---|
| ID | 5108534 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 2536522 |
|---|
| End bp | 2536884 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640503541 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001187789 |
|---|
| Protein GI | 146307324 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0791934 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0000121516 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTCA GCCACAATGT CCAACGCCTG GAACGTGCCA TCTCGCTCGC CACCGGCGCC
ACCGCCGTGG TCACCGGCCT TTGCCAGGGC GGTTCGAGGG GGGTACTCAA GGCGCTGGGC
GGCGCTGCGC TGCTGCAGCG CGGCTTCACC GGGCACTGCG TGGTCAAGGG GATGATCAGC
GATCCCAAGA CCGAACTCGA AGGCCTGCGC CAGTGCGTGG CCGACCTGCG CGCCGCCTTG
CCGCGGCTGC AGAAGGAACT GGAGGCCGTG CAGCAGCGCC AGACCGCGCC CGGAGCACGA
GAGGCACGGC TGGACAACGC GGTGGAAGAA ACCTTTCCCG CCAGCGACCC GATCTCGCCC
TGA
|
|---|
| Protein sequence | MSLSHNVQRL ERAISLATGA TAVVTGLCQG GSRGVLKALG GAALLQRGFT GHCVVKGMIS
DPKTELEGLR QCVADLRAAL PRLQKELEAV QQRQTAPGAR EARLDNAVEE TFPASDPISP
|
|---|
| |