Gene Pmen_2292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2292 
Symbol 
ID5108527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2526695 
End bp2527108 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content67% 
IMG OID640503534 
ProductCBS domain-containing protein 
Protein accessionYP_001187782 
Protein GI146307317 
COG category[R] General function prediction only 
COG ID[COG0517] FOG: CBS domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.173837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00000858428 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATCA GCAAGATCAT GACCCGCAAC GTCCGCACCC TCGAACCCGA GCGCAGCATC 
CGCGAGGCCG CGAGCCTGAT GGCCGACATC GACAGTGGCG CGCTGCTGAT CAACGAGGGC
GATCGCCTGA TCGGCATGGT CACCGACCGC GACATCGCCA TCCGCGCCGT GGCCGCCGGC
CTGGACGGCA ATACGCCGGT GCGGCAGGTG ATGAGCAGCA ACGTGCGCTA CTGCTTCGAC
GACGAGGACG TCGACCACGT CGCCGCCAAC ATGGCGGACC TGCAGGTGCG CCGCCTGCCG
GTGCTCAACC GCGAGAAGCG CCTGGTGGGC GTGGTGTCGC TGGGCAACAT CGCCTCCGGG
CATAGCCGCC AGGCCAACGA TACCGTCCTG CGCGGAGTGT CCAGCGCCCA TTGA
 
Protein sequence
MKISKIMTRN VRTLEPERSI REAASLMADI DSGALLINEG DRLIGMVTDR DIAIRAVAAG 
LDGNTPVRQV MSSNVRYCFD DEDVDHVAAN MADLQVRRLP VLNREKRLVG VVSLGNIASG
HSRQANDTVL RGVSSAH