Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2292 |
Symbol | |
ID | 5108527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2526695 |
End bp | 2527108 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640503534 |
Product | CBS domain-containing protein |
Protein accession | YP_001187782 |
Protein GI | 146307317 |
COG category | [R] General function prediction only |
COG ID | [COG0517] FOG: CBS domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.173837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00000858428 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAATCA GCAAGATCAT GACCCGCAAC GTCCGCACCC TCGAACCCGA GCGCAGCATC CGCGAGGCCG CGAGCCTGAT GGCCGACATC GACAGTGGCG CGCTGCTGAT CAACGAGGGC GATCGCCTGA TCGGCATGGT CACCGACCGC GACATCGCCA TCCGCGCCGT GGCCGCCGGC CTGGACGGCA ATACGCCGGT GCGGCAGGTG ATGAGCAGCA ACGTGCGCTA CTGCTTCGAC GACGAGGACG TCGACCACGT CGCCGCCAAC ATGGCGGACC TGCAGGTGCG CCGCCTGCCG GTGCTCAACC GCGAGAAGCG CCTGGTGGGC GTGGTGTCGC TGGGCAACAT CGCCTCCGGG CATAGCCGCC AGGCCAACGA TACCGTCCTG CGCGGAGTGT CCAGCGCCCA TTGA
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Protein sequence | MKISKIMTRN VRTLEPERSI REAASLMADI DSGALLINEG DRLIGMVTDR DIAIRAVAAG LDGNTPVRQV MSSNVRYCFD DEDVDHVAAN MADLQVRRLP VLNREKRLVG VVSLGNIASG HSRQANDTVL RGVSSAH
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