| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2275 |
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| Symbol | |
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| ID | 5108510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2504397 |
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| End bp | 2505527 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503517 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001187765 |
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| Protein GI | 146307300 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | [TIGR02019] bacteriochlorophyll 4-vinyl reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.312032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0129381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACGG AAACCGCATT GAACGGTGAC TGGCTCGCCT TCGTGCCCTG GCCAGAGTTG
AGAACCCTGC TCGTCGCCGT GATCGCGGCG GCTCTGGCCA GCCTGTTCTT CGGCACCCTG
TTGCGCCTGC TGGCGCGTTT CAGCGGTGCC CTGCCCTTTG CCCATGTGCT GCTGCAAAGC
ACGCGTGACC CGCTGCGCTG GTTGCTGCCG CTGCTGGCCA TGCAACTGGT GCTCAACGCC
GCCCCGGACA ATATGGCGCT GATCGGCGAG GCCAGACGCC TGGCGGCGCT GGTCACCATC
GGCGTATTTA CCTGGCTCGG CCTGCGCGCA GTCGGGGCGG TTCAGCGCAT CGTCGTGCTG
TACAACCCGG TGGACACGGC CGACAACCTG CAGGCGCGGC GCATCCAGAC GCAGACCCGC
GTGCTGGTGC GCATCCTCAG CGTGTTCGTG GTGATCTTCG GCTTCTCCAC CATGCTCATG
ACCTTCCCCG CGGCGCGCCA GTTCGGCACC AGTCTGCTGG CGTCGGCCGG CCTCGCCGGT
CTGGCCGTGG GCTTTGCCGC CAAGCCGGTG CTGGGCAACC TGATCGCCGG TCTGCAGATC
GCCCTGACCC AGCCGATCCG CCTGGACGAC GTGGTGATCG TCGAAAACGA ATGGGGGCGC
ATCGAAGAGA TCACCGGCAC CTACGTGGTG GTGCGCATCT GGGACGATCG CCGGCTGGTG
GTGCCCCTGC AGTGGTTCAT CGAGAACCCC TTTCAGAACT GGACGCGGCA GACCAGCTCG
ATCACCGGTT CGGTGTTCTT CTGGGTGGAT TACGCCACCC CGCTCGAGCC GCTGCGCCAG
GAGCTGACGC GCCTGTGTCA GGAGGCGCGA CACCTGTGGG ACGAGCGCGT CAACGTGCTG
CAGGTGGTGG ACACCAGCGA CCGCGCCATC CAGCTGCGGG TGCTGGTCAG CTCGCCGGAC
TCCTCGCGCA ACTGGGACCT GCGCTGCTAC ATCCGCGAGA ACCTGATCAC CTTCATCAGC
AACCGCTATC CCGATCACCT GCCGCGACTG CGCGCCAACC TGCACGGCAG TGAAGACGCG
GCGCCGCGCA ACACCCCCAC TGCCGATGCG CAGCGCCAGC CGCCGGTGTA A
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| Protein sequence | MPTETALNGD WLAFVPWPEL RTLLVAVIAA ALASLFFGTL LRLLARFSGA LPFAHVLLQS
TRDPLRWLLP LLAMQLVLNA APDNMALIGE ARRLAALVTI GVFTWLGLRA VGAVQRIVVL
YNPVDTADNL QARRIQTQTR VLVRILSVFV VIFGFSTMLM TFPAARQFGT SLLASAGLAG
LAVGFAAKPV LGNLIAGLQI ALTQPIRLDD VVIVENEWGR IEEITGTYVV VRIWDDRRLV
VPLQWFIENP FQNWTRQTSS ITGSVFFWVD YATPLEPLRQ ELTRLCQEAR HLWDERVNVL
QVVDTSDRAI QLRVLVSSPD SSRNWDLRCY IRENLITFIS NRYPDHLPRL RANLHGSEDA
APRNTPTADA QRQPPV
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