Gene Pmen_2272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2272 
Symbol 
ID5109215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2500886 
End bp2501212 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content59% 
IMG OID640503514 
Producthypothetical protein 
Protein accessionYP_001187762 
Protein GI146307297 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0443527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.00288 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGAGGT ATAAGTATCT CGATAGCATC ACCGCTTATA ACAGTTGCGC CAGCGCTTGC 
GAACATTGCG CAAGCGTTTG TCTGACCGAG AAAAAGGCCG AATGTTTTCG CTGCATTCAG
TTATGCCGTG ACTGCGCGGA TTTGTGCCGA CTGACAGCTA CCCTGATGTT GCGTGACAGC
GACTACGCGG CGGTGGCGAG CCAGCTGTGC CGAGTCGCCT GCCTGGCCTG TGCCGAGGAG
TGCGCCCTGC ATGCCAGCGC GCATTGCCAG GAGTGCGCGC GTAGCTGTCA GGTGTGCGCG
GAAGAACCCT CATTGGAGCA GGTCTGA
 
Protein sequence
MERYKYLDSI TAYNSCASAC EHCASVCLTE KKAECFRCIQ LCRDCADLCR LTATLMLRDS 
DYAAVASQLC RVACLACAEE CALHASAHCQ ECARSCQVCA EEPSLEQV