Gene Pmen_2262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2262 
Symbol 
ID5109205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2492103 
End bp2492567 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content64% 
IMG OID640503504 
Producthypothetical protein 
Protein accessionYP_001187752 
Protein GI146307287 
COG category 
COG ID 
TIGRFAM ID[TIGR02284] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0132862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0310926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTCA CAGACGATCG CAAAGAGCTT GTCCGCACCC TCAACAAACT GATCGAAACC 
TGCAAGGACG GCGAGGCCGG CTTCAAGGTC TGCGCCGAAG ACATCAAGCG CCCGGACATC
AAGCAGCTGT TCACCCAGCG CGCGCGGCAA TGCGGCGAAG CCGCCGCCGA GCTGCAACGT
GTGGTGCTGG AGTTCGGCGG TGAGCCGGAA GACAGCACCA GCATCAGCGC TGACCTGCAT
CGCCGCTGGG TCGATCTCAA GTCGCTGGTG ACCGGCAAGG ACGAGGAGGC GATCCTCAAC
GAGGCGGAGC GCGGCGAGGA TGTCGCCAAG GAGCGTTACA GCGAGGCCTT GAGCAAGAAC
CTGCCGACGG ATATCCGCGC CATGGTGCAG CGCCAGTACG AGGGTGTGCT GCGCAATCAC
AACGAGGTCA GGGCGTTGCG TGACGCAGAG CGCGCCAAGA GCTGA
 
Protein sequence
MELTDDRKEL VRTLNKLIET CKDGEAGFKV CAEDIKRPDI KQLFTQRARQ CGEAAAELQR 
VVLEFGGEPE DSTSISADLH RRWVDLKSLV TGKDEEAILN EAERGEDVAK ERYSEALSKN
LPTDIRAMVQ RQYEGVLRNH NEVRALRDAE RAKS