Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2240 |
Symbol | |
ID | 5109184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2470859 |
End bp | 2471596 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640503483 |
Product | hypothetical protein |
Protein accession | YP_001187731 |
Protein GI | 146307266 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00222904 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCGC TTCCCCTAAG CGGGGCAACG GCGCTGATCG CACGCCTGCG TCGATCGCTC TTTCTGCCCT TGCTTACCCT CGCTTTACTG ATGGCAGTCA TGCCTGAGGC GCTAGCCCAC GGCGTGCCCG AAGGAGACAA AGGCTTCATC CAGGAAAGTA CCGGCGTGAT GTTGATGCCC TTCATCTACA TGGGCGCCAA ACACATGATT ACCGGCTACG ACCATCTGCT GTTCCTGTTC GGCGTGATCT TCTTTCTCTA CCGCCTGAAG GACGTAGGGC TGTACGTCAC GCTGTTCGCA GTTGGCCACT CGATCACTCT GCTCTTTGGA GTGCTCAGCA ACATCAGCAT CAGCTCGTAT GTGATCGACG CGATCATCGG CTTTTCGGTC GTGTACAAGG CCCTGGATAA CCTCGGCGCC TTCCAGCGCT GGTTTGGCTA CCAGCCCGAT ACCCGTGCAG CAACGCTGAT CTTCGGCCTG CTTCATGGCT TCGGTCTGGC CACCAAGATC CAGGAGTTCG AGATTTCTCC TGATGGCCTG ATCGCCAACC TGATTGCCTT CAACGTAGGT GTCGAGATCG GCCAGCTACT GGCCCTCGGC GGCATTCTCA TTTTGATGGG CTACTGGCGA CGTACTGCCA GCTTCTGGCG CCATGCCTAT ACCGCGAACG TCGCCATGAT GAGTGCCGGC TTCTTGCTCA TGGGCTACCA GATCACTGGC CTGATCGTCT CTCAGTAA
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Protein sequence | MNSLPLSGAT ALIARLRRSL FLPLLTLALL MAVMPEALAH GVPEGDKGFI QESTGVMLMP FIYMGAKHMI TGYDHLLFLF GVIFFLYRLK DVGLYVTLFA VGHSITLLFG VLSNISISSY VIDAIIGFSV VYKALDNLGA FQRWFGYQPD TRAATLIFGL LHGFGLATKI QEFEISPDGL IANLIAFNVG VEIGQLLALG GILILMGYWR RTASFWRHAY TANVAMMSAG FLLMGYQITG LIVSQ
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