Gene Pmen_2240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2240 
Symbol 
ID5109184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2470859 
End bp2471596 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content57% 
IMG OID640503483 
Producthypothetical protein 
Protein accessionYP_001187731 
Protein GI146307266 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00222904 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCGC TTCCCCTAAG CGGGGCAACG GCGCTGATCG CACGCCTGCG TCGATCGCTC 
TTTCTGCCCT TGCTTACCCT CGCTTTACTG ATGGCAGTCA TGCCTGAGGC GCTAGCCCAC
GGCGTGCCCG AAGGAGACAA AGGCTTCATC CAGGAAAGTA CCGGCGTGAT GTTGATGCCC
TTCATCTACA TGGGCGCCAA ACACATGATT ACCGGCTACG ACCATCTGCT GTTCCTGTTC
GGCGTGATCT TCTTTCTCTA CCGCCTGAAG GACGTAGGGC TGTACGTCAC GCTGTTCGCA
GTTGGCCACT CGATCACTCT GCTCTTTGGA GTGCTCAGCA ACATCAGCAT CAGCTCGTAT
GTGATCGACG CGATCATCGG CTTTTCGGTC GTGTACAAGG CCCTGGATAA CCTCGGCGCC
TTCCAGCGCT GGTTTGGCTA CCAGCCCGAT ACCCGTGCAG CAACGCTGAT CTTCGGCCTG
CTTCATGGCT TCGGTCTGGC CACCAAGATC CAGGAGTTCG AGATTTCTCC TGATGGCCTG
ATCGCCAACC TGATTGCCTT CAACGTAGGT GTCGAGATCG GCCAGCTACT GGCCCTCGGC
GGCATTCTCA TTTTGATGGG CTACTGGCGA CGTACTGCCA GCTTCTGGCG CCATGCCTAT
ACCGCGAACG TCGCCATGAT GAGTGCCGGC TTCTTGCTCA TGGGCTACCA GATCACTGGC
CTGATCGTCT CTCAGTAA
 
Protein sequence
MNSLPLSGAT ALIARLRRSL FLPLLTLALL MAVMPEALAH GVPEGDKGFI QESTGVMLMP 
FIYMGAKHMI TGYDHLLFLF GVIFFLYRLK DVGLYVTLFA VGHSITLLFG VLSNISISSY
VIDAIIGFSV VYKALDNLGA FQRWFGYQPD TRAATLIFGL LHGFGLATKI QEFEISPDGL
IANLIAFNVG VEIGQLLALG GILILMGYWR RTASFWRHAY TANVAMMSAG FLLMGYQITG
LIVSQ