| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2238 |
|---|
| Symbol | |
|---|
| ID | 5109182 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 2469164 |
|---|
| End bp | 2469550 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640503481 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001187729 |
|---|
| Protein GI | 146307264 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.000319661 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGTC TTATCGAGCG ACTTGGGCTG CCCCACAGCC ATAAGAGCCT GCACCAGGCG
ACCATAACAG GACTCCCGGT TGAGCTAACC TCGCGCTTGG CGGAGGAGTT GGGTATTGAT
GCCTGCGTCG TGGCAGGCTG GATCGGCATC GCTCCAGAGG CTTCCCTCAT GACTTCAGCA
GAAGGCGATG CGTTTTGTCG ACTGGCGAAT CTTGTCGACG TGCTGATGAG TGTCTTGGAA
TCAGATCAAG CCGCAGCGAC TCGCTGGCTC ACGTCGCCAA ATATTGCGCT AGGAAATGTG
CAACCCGTTT CCCTGCTGAG CACCGAAGTC GGCGGTCGAG CTGTACGCCA GGTGATGCTT
GCCATTGAGT ACGGACTGCC GGTCTGA
|
|---|
| Protein sequence | MKSLIERLGL PHSHKSLHQA TITGLPVELT SRLAEELGID ACVVAGWIGI APEASLMTSA
EGDAFCRLAN LVDVLMSVLE SDQAAATRWL TSPNIALGNV QPVSLLSTEV GGRAVRQVML
AIEYGLPV
|
|---|
| |