Gene Pmen_2227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2227 
Symbol 
ID5106591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2459164 
End bp2459469 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content52% 
IMG OID640503470 
ProductPadR family transcriptional regulator 
Protein accessionYP_001187718 
Protein GI146307253 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.42968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGGACA AAGATCTCTA CGGCGGTTTG ATCCGCTTGC ACATTCTGCA CCACGCGGTC 
GAAGAGCCCG TTTTCGGTCT CGGTATCATC GAAGAACTGA GGCGTCACGG TTACGAGATC
AGCGCAGGTA CCCTGTATCC AATGCTCCAT GGATTGGAAA AGAAGGGTTA TCTGACCTCC
AACAATGAGC GCAGAGATAG CCGTGACCGC CGCGTCTATC AGATAACTGA TCATGGCAAA
GTTGCGCTCG CCGATGCGAA AGCAAAGGTT AGAGAGTTAT TCGGGGAGTT AATAGAAGAG
CGCTGA
 
Protein sequence
MTDKDLYGGL IRLHILHHAV EEPVFGLGII EELRRHGYEI SAGTLYPMLH GLEKKGYLTS 
NNERRDSRDR RVYQITDHGK VALADAKAKV RELFGELIEE R