| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2183 |
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| Symbol | |
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| ID | 5109523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2412164 |
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| End bp | 2413078 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640503427 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001187675 |
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| Protein GI | 146307210 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.573437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0364497 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCA ACGACCTGCG TCGCCTCGAC CTGAACCTGC TGATCGTCTT CGAGACCCTG
ATGCACGAGC GCAGCGTTAC CCGGGCTGCG GAGAAGCTGT TCCTGGGCCA GCCGGCCATT
AGTGCCGCGC TCGCCCGCCT GCGCACCCTG TTCGATGATC CCCTGTTCGT GCGCACCGGC
CGCAGCATGG AGCCGACACC CCGCGCGCAG GAAATCTTCG CCCTGCTCTC GCCGGCACTG
GACTCGATTT CCACCGCGGT CAGTCGCGCT GCCGACTTCG ACCCGGCCAC CAGCAAGGCG
GTGTTTCGTG TCGGCCTGTC CGACGACGTG GAGTTCGCCC TGCTCCCCGC CCTGCTCCGC
CGTCTGCGCG CCGAGGCCCC GGGCGTGGTT CTGGTGGTTC GTCGCACCAA CTACCTGATG
ATGCCGGGGC TGCTCGCTTC CGGGGAAATC TCCGTGGGCG TGTCCTACAC CGAGGAGCTG
CCGGCCAATG CCAAACGCAA GGTGTTGCGC CGCAGCAAGG CCAAACTGCT GCGCGCCGAC
ACCGCCCCCG GCGCGCTGAG CCTCGAGGAC TATTGCGCCC GCCCTCATGC CCTGGTGTCC
TACGCGGGCG ACCTCACCGG CTTCATCGAT GAGGAACTGG AGAAGGTCGG CTGCAAACGC
CATGTGGTAC TGGCCGTGCC GCAGTTCAAC GGCCTGGCCA GTCTGCTGGC GGAAACCGAC
ATCGTCGCCA GCGTGCCGGA CTACACCGCT GCCGCCCTGA CGGCCGCCGG CGGCCTGCGC
GCCGAGGAGC TGCCACTGGA AACCCCCTCG TTCGAACTGC ACATGGCCTG GCGCGGTGCT
CAGGACAACG ATCCGGCCGA ACGCTGGCTG CGGTCGCGCA TTCAGATGTT CTGCGGCGAT
CCGGACAGCC TGTAA
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| Protein sequence | MNRNDLRRLD LNLLIVFETL MHERSVTRAA EKLFLGQPAI SAALARLRTL FDDPLFVRTG
RSMEPTPRAQ EIFALLSPAL DSISTAVSRA ADFDPATSKA VFRVGLSDDV EFALLPALLR
RLRAEAPGVV LVVRRTNYLM MPGLLASGEI SVGVSYTEEL PANAKRKVLR RSKAKLLRAD
TAPGALSLED YCARPHALVS YAGDLTGFID EELEKVGCKR HVVLAVPQFN GLASLLAETD
IVASVPDYTA AALTAAGGLR AEELPLETPS FELHMAWRGA QDNDPAERWL RSRIQMFCGD
PDSL
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