Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2177 |
Symbol | |
ID | 5109517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2403026 |
End bp | 2403391 |
Gene Length | 366 bp |
Protein Length | 121 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640503421 |
Product | hypothetical protein |
Protein accession | YP_001187669 |
Protein GI | 146307204 |
COG category | [S] Function unknown |
COG ID | [COG2315] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.669035 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.0733999 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATGC CCATGACGCC CGACCAGATC GCCAGCTTCT GCCTCAGCCT GCCGGGCGCC CGCGAAGACC TCAAGTGGGG CAGCAACCGG GTGTTCTCGG TAGCCGGCAA CAAGATGTTC GCCATCCTCG ATTTTCTGGG CGAGGATCTG GCCTTCAAGG TCGATCACGA CCTCTTTCTC GGCTACGTCG ACCGCCCCGG CATTCGCCCC GCGCCCTATC TGGCGCGAGC GCACTGGGTC AGCATGAGCG CCCGCCAGCT ACCGCTTGGC GACCAAGAGC TGCGCCAGTT GCTGACCCGT TCCCATCAGT TAGTGGTACG CCGACTGCCC AAGCGCCTGC AGCCCGGTCT GCTACTGGAC GAATAG
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Protein sequence | MDMPMTPDQI ASFCLSLPGA REDLKWGSNR VFSVAGNKMF AILDFLGEDL AFKVDHDLFL GYVDRPGIRP APYLARAHWV SMSARQLPLG DQELRQLLTR SHQLVVRRLP KRLQPGLLLD E
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