Gene Pmen_2177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2177 
Symbol 
ID5109517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2403026 
End bp2403391 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content64% 
IMG OID640503421 
Producthypothetical protein 
Protein accessionYP_001187669 
Protein GI146307204 
COG category[S] Function unknown 
COG ID[COG2315] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.669035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0733999 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATGC CCATGACGCC CGACCAGATC GCCAGCTTCT GCCTCAGCCT GCCGGGCGCC 
CGCGAAGACC TCAAGTGGGG CAGCAACCGG GTGTTCTCGG TAGCCGGCAA CAAGATGTTC
GCCATCCTCG ATTTTCTGGG CGAGGATCTG GCCTTCAAGG TCGATCACGA CCTCTTTCTC
GGCTACGTCG ACCGCCCCGG CATTCGCCCC GCGCCCTATC TGGCGCGAGC GCACTGGGTC
AGCATGAGCG CCCGCCAGCT ACCGCTTGGC GACCAAGAGC TGCGCCAGTT GCTGACCCGT
TCCCATCAGT TAGTGGTACG CCGACTGCCC AAGCGCCTGC AGCCCGGTCT GCTACTGGAC
GAATAG
 
Protein sequence
MDMPMTPDQI ASFCLSLPGA REDLKWGSNR VFSVAGNKMF AILDFLGEDL AFKVDHDLFL 
GYVDRPGIRP APYLARAHWV SMSARQLPLG DQELRQLLTR SHQLVVRRLP KRLQPGLLLD
E