| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2176 |
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| Symbol | |
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| ID | 5109516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2402318 |
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| End bp | 2403040 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640503420 |
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| Product | hypothetical protein |
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| Protein accession | YP_001187668 |
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| Protein GI | 146307203 |
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| COG category | [K] Transcription
[S] Function unknown |
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| COG ID | [COG1278] Cold shock proteins
[COG3326] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.979062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0387048 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGGCA ACGAACGCAA AGGGCGCCTG AGAAGTTGGG ATGACGCCAA GGGTTTTGGT
TTCATCCAGC CGCAAGACGG TGGAGCCGAG GTTTTCGCTC ATATCTCGGC GATGCGCGGC
GACCGCCGCC CGCAGCCGGG TGACGAGGTG CTGTTCGTCG CCGGGCGTGA TCCGCGCGGT
CGGCCGCGTG CCGAACACCT GCGCCTGGCC GGTGAACTGA GCCTTGATCG GCCGGCGATC
CGGCGCAAAC CGAAAACGCC CGGCACGGCG GCACCGGTAG TGCGAAAGGC TGCTGCCAAA
TCCACACACC GATCATCGAC TCAAGGCTCC ATCCATAACT TTTCCAGCAA GGCCTTGGTG
CTCGCTTTGC TGTGCATCCT GCCATTGCTC GGCTGCGTGA CGCTGTTCGG CAAGGGGCTC
TGGTGGATAT TGCCGCTTTA TCTGCTGGCC AGCCTGCTGA GTTTCCTGCA GTACTGGCTG
GACAAGCGCA GCGCTCAGGG TGGCGGACGA CGCACGCCGG AGAACACCCT GCATCTGGTG
GAGCTGATCG GTGGCTGGCC GGGTGCGCTG GTCGCTCAGC AGACCTTCCG CCACAAGACG
CGCAAGGCCT CCTATCAGGC GCTGTTCTGG CTGATCGTCG CGGCGCATCA ACTGTTGTGG
ATCGATTGGC TGCTGCTCGA CGGCGCCTAC ATCGCCCGCC ATATCCCGCT ATTCGTCCAG
TAG
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| Protein sequence | MSGNERKGRL RSWDDAKGFG FIQPQDGGAE VFAHISAMRG DRRPQPGDEV LFVAGRDPRG
RPRAEHLRLA GELSLDRPAI RRKPKTPGTA APVVRKAAAK STHRSSTQGS IHNFSSKALV
LALLCILPLL GCVTLFGKGL WWILPLYLLA SLLSFLQYWL DKRSAQGGGR RTPENTLHLV
ELIGGWPGAL VAQQTFRHKT RKASYQALFW LIVAAHQLLW IDWLLLDGAY IARHIPLFVQ
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