| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2160 |
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| Symbol | |
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| ID | 5109500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2385961 |
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| End bp | 2388237 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503404 |
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| Product | fatty acid cistrans isomerase |
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| Protein accession | YP_001187652 |
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| Protein GI | 146307187 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.279202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0207501 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAGC CTGCTGCCCT GTTTTTTCTT TCCATCGCAG CAGGCCTGGC CCGTGCCGAA
GCGATCTCCT ACATCGACGA CGTCCAGCCC ATCCTCACCC ACAAGTGCAT AGCGTGCCAT
GCGTGCTATG ACGCACCCTG CCAGCTCAAC CTGGGCAGCG GCGAGGGCAT GTTGCGCGGC
GCCAGCAAGC AGCCGGTGTA CGACGGCACG CGCAGCAAGG CACAGGCGAC CACACGGCTG
TATCTGGATG CACAGGGGGA GGCGGCCTGG CGCCAGCGCG GCTTTCATTC GGTGCTCGCT
GGCGAGAACG GCCAGGCGGC GCTGATCAAA CGCATGCTGG AGCTGGGCCG CAGCCAGCCG
CTCGAACCCA ACGCCAAGCT GCCCGGCAAC CTCGATATCG CCATTACCCG CAGCAACAGC
TGCCCATTGC CGGGTGAGTT CGCCGCCTAT GCGCAGAAGA ATCCCCACGG CGGCATGCCG
TTCGCGGTCA CCGGCCTGAG CGATGACGAA TACGCCACGC TGCAGCAGTG GCTGGCCCAG
GGCGCGCCGG TGGCCGAGCA GAAGTTGCAG CCTTCGGTCG CCGAGCTGGA GCAGATCGCC
AGGTGGGAGG CGTTTCTCAA TGCCCCTGGC GCGCGGCAGG ACCTGGTTTC GCGCTGGTTG
TACGAGCATC TGTTTTTAGC CCATCTGCAC TTCGCTGGCG GCGAACCCGG GCATTTCTTC
CAGCTGGTGC GCTCGCGCAC GCCCAGTGGC CAGCCCATCG ATCCCATCGC CACGCGTCGC
CCCAACGACG ATCCGGGTAC CGAGTTCCAC TATCGCTTGT GGCCGATCCA GGGCGTCATC
GTGCACAAGA CCCATATCAC CTACCCACTG AGCGATGCCG GGCTGGCGCG CGTGCAGGCG
CTGTTCTTCG GCGAAGACTG GCCGCTGGAC GCCGTGCCGG GCTATGGTGC GCAGCGCCGC
GCCAATCCCT TCGAGACCTT CGCCGCGATT CCGCCAAGGG CGCGTTACCA GTTCATGCTG
GATAACGCCG AGTATTTCGT GCGCACCTTC ATCCGCGGTC CGGTGTGCCG CGGGCAGATC
GCCACCGATG TGATCCGCGA CAACTTCTGG GCCCTGTTCC AGGCGCCGGA GCATGACCTG
TATGTCACCG ATGCGGCCTA TCGCAGCGAA GCCACGCCGC TGCTGGCGAT GCCGGGACAG
TTCGATGAGA TCGGCGATCT GCCGGGGCTC TGGCGTGATT ACCGCAACAA GCGCAACGCC
TACGAAAATC TCCGCAAGGA GGCCTACGCC GATGCGCCGC CGGCCGACTG GGCGCATATC
TGGAGCGGTA ACGACAACGC GCTGCTGTCG ATCTTCCGCC AGCACGACAG CGCCTCGGTG
CGCAAAGGGC TGCTCGGCGA GATTCCACAG ACCCTCTGGT GGATGGACTA CCCGCTGTTC
GAGCGCACCT ACTATCAACT GGTGGTCAAT TTCGACGTGT TCGGCAACGT CTCGCATCAG
GCGCAGACCC GCCTGTATTT CGACCTGATC CGCAACGGCG CCGAGGTCAA TTTCCTCCGC
CTGCTGCCGG CCGGGGCGCG CAAGGGCTAC CTGGACGACT GGTACCAGAA CAGCGGCAAG
CTGAAGATGT GGCTGGATTA CACCTCGGTC GATCATCGCA GCCCGAGCGG CCTCACCCTG
GAAGACCAGA ATCCCAAGCA GCAATTCGCC GTGCAGCTGC TGCAGCGCTA CGCCGGCCTC
AACGCGCGTC CGGACCCGAT CAACCGCTGC ACTGGGGCCC ATTGCCATCG CGATGGCTTG
CCGCCCGAGC TGAGGGATGC GGAGCAGACG CTGTCGCGCC TGGCCAGTCG TCCGGCGGGC
GGCCTGCGGG TGATCCGCCA GTTGCCGGAG GCGACGTTGC TGCGGGTGGA GCTTGCCGAC
GGCTCGCGCG AGGTTTACAG CCTGCTGCGC AACCGCGCGC ACAGCAATGT GGCGTTCATG
CTGGGTGAAG AGCTGCGCTA CCAGCCGCGT CTGGATACGC TGACCATCTA CCCCGAGGTG
CTCAGCAGCT ATCCGAACTT CCTGTTCAGC CTCAAGGCCA GCGAGATGGA CGAGTTTGTC
GCGCAGATGG AGCGCGCTGC CGATGCAGCG GCTTTCGAGC GCATCGTCGA GCGGTGGGGC
ATTCGCCGCA GCCACCCGCA GTTCTGGCGC TATTTCCATG ACCTGGCCGA ACACATCCGC
GAAACCCAAC CAGTGGAGGC GGGTGTGCTG GATATGAATC GCTACCAGAA CCTCTGA
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| Protein sequence | MLKPAALFFL SIAAGLARAE AISYIDDVQP ILTHKCIACH ACYDAPCQLN LGSGEGMLRG
ASKQPVYDGT RSKAQATTRL YLDAQGEAAW RQRGFHSVLA GENGQAALIK RMLELGRSQP
LEPNAKLPGN LDIAITRSNS CPLPGEFAAY AQKNPHGGMP FAVTGLSDDE YATLQQWLAQ
GAPVAEQKLQ PSVAELEQIA RWEAFLNAPG ARQDLVSRWL YEHLFLAHLH FAGGEPGHFF
QLVRSRTPSG QPIDPIATRR PNDDPGTEFH YRLWPIQGVI VHKTHITYPL SDAGLARVQA
LFFGEDWPLD AVPGYGAQRR ANPFETFAAI PPRARYQFML DNAEYFVRTF IRGPVCRGQI
ATDVIRDNFW ALFQAPEHDL YVTDAAYRSE ATPLLAMPGQ FDEIGDLPGL WRDYRNKRNA
YENLRKEAYA DAPPADWAHI WSGNDNALLS IFRQHDSASV RKGLLGEIPQ TLWWMDYPLF
ERTYYQLVVN FDVFGNVSHQ AQTRLYFDLI RNGAEVNFLR LLPAGARKGY LDDWYQNSGK
LKMWLDYTSV DHRSPSGLTL EDQNPKQQFA VQLLQRYAGL NARPDPINRC TGAHCHRDGL
PPELRDAEQT LSRLASRPAG GLRVIRQLPE ATLLRVELAD GSREVYSLLR NRAHSNVAFM
LGEELRYQPR LDTLTIYPEV LSSYPNFLFS LKASEMDEFV AQMERAADAA AFERIVERWG
IRRSHPQFWR YFHDLAEHIR ETQPVEAGVL DMNRYQNL
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