Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2152 |
Symbol | |
ID | 5109492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2374539 |
End bp | 2375366 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640503396 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001187644 |
Protein GI | 146307179 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.488211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.369795 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACCA TGTTTGACGA CGACTTTCCC GACGATACCG CGCAGACCGA GCGCACCCGC CAGATCATCC TGCGCTATCA CCTGAGCTGG AAGCAGCGCG ATCTGGAGGC GGTGCTGGCG CTGTATCACC CGCAGGTGGA GTACAACGAT TTCTATCAAC AGCGCAGCAT GCAGCTGGCC GAGCTGCGCG CCTACGTCGC CGGCAACCTG CCGCGCCATC CCGGCGAGTC GCTGGAGCAC TTCGACCGCA TCCGCATCGA CGGTCACACC GCGTTCATCC AGTACCGCAC CCGTGTGCAA GGCAGCGAGG GGCTGGTGTC GTTCTGCACC GGCGAGGCCA TCACCGTACG CGACGGGTTG ATCTGGCGCG TCAACGAGTA CGCCACCCTG GTGCGCGAGC AGCAGCCGCT CGATGCGCCC GGTGCGCGGC CGGCGATCAG TCGCCTGGGG CTGTCGAGCC GCCAGCTCGG GCAGATGGCG CAGGACCTGC AGGACTATTT CCAGCGCAGC CAGCCCTTTC TCGACCCCGA GCTGAACCTG CAGCAGGTGG CGACGGCCAC CGGCTACAGC CGCAACCAGG TTTCCCACCT GCTCAATCAG GTGCTCGGTG AAAGCTTTTA CCGTTACGTC AATCGCGCGC GCCTGCAGTA CCTGCTGGCG GGGCTCGAGG CTGACAGCGA CCCGGTGCGT ATCGACGAGC TGGCATTCGC TGCCGGCTTC AACTCGCTAT CGGCGTTCTA CAGCTGCTTT CGGCGTCATA CCGGGCTTTC TCCCAAGGCC TATCTCAAGC AGCTCTCCTT GCGGGCGCGC ACACAAGACG GCCGCTGA
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Protein sequence | MPTMFDDDFP DDTAQTERTR QIILRYHLSW KQRDLEAVLA LYHPQVEYND FYQQRSMQLA ELRAYVAGNL PRHPGESLEH FDRIRIDGHT AFIQYRTRVQ GSEGLVSFCT GEAITVRDGL IWRVNEYATL VREQQPLDAP GARPAISRLG LSSRQLGQMA QDLQDYFQRS QPFLDPELNL QQVATATGYS RNQVSHLLNQ VLGESFYRYV NRARLQYLLA GLEADSDPVR IDELAFAAGF NSLSAFYSCF RRHTGLSPKA YLKQLSLRAR TQDGR
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