Gene Pmen_2097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2097 
Symbol 
ID5109831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2325681 
End bp2327345 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content71% 
IMG OID640503341 
Productprotein kinase 
Protein accessionYP_001187590 
Protein GI146307125 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase
[COG0631] Serine/threonine protein phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0694444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTGC AACTGAGCAT CGGCGAAACC AGCGCCATCG GCCCGCGCAG CGAAAACCAG 
GACGCCCTGC GCGTGGTAAC CCCGGCGCCG GCCTTGGCCG CTAGCAAGGG CTACCTGCTG
GGCCTGGCCG ATGGCGTGAG CCAGTGCGCC GACGGCGGCC TGGCCGCGCG CGCCACCTTG
CAGGCGCTCG CCCTGGATTA CTACTCCACG CCGGAAACCT GGCCGGTGCA GCACAGCCTG
GACCGCCTGC TCACCGCGCA TAACCGCTGG CTGCACGCGG CAGGCGGCGG CCAGCCGCTG
CTCACCACCC TCACCGCCCT GGTGCTGCGC GGCCGCCGCT ATATCCTGGC GCATATCGGC
GACAGCCGTG CCTACCTTTC GCGTGACGGC CACCTGCTGC GCCTGACCGA GGACCATGTC
TGGGAACAGC CGGGCATGCA GCACGTGCTC AAGCGCGCCA TGGGCCTGGA CCAGCACCTG
GTGGTGGACT ACCGCGACGG CGAGCTGCAG GCCGGCGACC GTTTCCTGCT GGTCAGCGAC
GGCGTCTGGG CCTGCCTCAG CGACAAGCGC ATCGGCGAGT TGCTACAGGG CGACGATACC
CAGGTGATCT GCCAGGCGCT GGTCGGCGAG GCCCACCGAG CCGGCAGCCA GGACAACGCC
AGCGCCCTGC TGGTGCAGGT CGAGCAGCTC CCGGAAGCCG CGCTGGCCGA CACCCTGGCC
CAGCTTGAAC ATTGGCCTCC GCCGCCGCGT CTGCGCGACG GCCAGGAGTT CGAGGGCTGG
CAGGTCGAAC GGCTGCTAGG CGAATCGCGC CAGTCGCTGA TCTACCGGGT ACGCGATACC
GACAATCAGC CCTGGCTGCT CAAGACCCTG CCGGCCAGCC GCGCCGGTGA GGAGCAGGCC
GGCCCGGCGC TGCTGCAGGA GGAATGGTTC CTGCGCCGCG TCGCCGGCCG CCACTTCCCC
GAGCTGCACG CCCTGCCGCA GCGCCAGCAC CTGTATTACG TGCAGCGCGA GTACGCCGGT
CAGACCCTGG CCGCGCGCCT GCAACAGCAT GGCCCGCTGA GCCTGGCCGA CTGGCAGGAC
CTGGCGCCGC GGCTGATCAA GGCGCTCGGC CTGCTGCACC GGCGCAATAT CATCCACCGC
GACATCAAGC CGGAGAACCT GCTGCTCGGC GACGACGGCG AACTGCGCGT GCTGGACTTC
GGCCTGGCCT ACTGTCCGGG CCTGACCCGC GACGAGGCGC ATGCCCTGCC CGGCACCCCC
AGCTATATCG CCCCGGAAGC CTTCGCCGGC AGCCCGCCCA GCGCCCAGCA GGATCTCTAC
GCCGCCGGCG TGACCCTCTA CCACCTGCTC ACCGGTCACT ATCCCTATGG CGAGGTCGAG
GCCTTCCAGC ACCCGCGCTT CGGCCAGCCG CCCCCGGCCA GCCGCTATCG CCCGGACCTG
CCGGCCTGGC TCGACGAGGT GTTGAACCGC GCGGTAGCCG CTGCCCCGGC GCAGCGCTTC
GAAACCGCCG AGGAATGGCT GCTGGCCCTG GAAAGCGGCG AGCGCCAGTC GCTGAACAAC
CGTCCACGAC CGCTGCTGGA ACGCGAGCCG CTGTTGGTCT GGCGCACGGT GGCGCTGGTG
TCGCTGCTGC TTAACCTGCT GCTGGCGCTG CTGCTGCTCA AATAG
 
Protein sequence
MPLQLSIGET SAIGPRSENQ DALRVVTPAP ALAASKGYLL GLADGVSQCA DGGLAARATL 
QALALDYYST PETWPVQHSL DRLLTAHNRW LHAAGGGQPL LTTLTALVLR GRRYILAHIG
DSRAYLSRDG HLLRLTEDHV WEQPGMQHVL KRAMGLDQHL VVDYRDGELQ AGDRFLLVSD
GVWACLSDKR IGELLQGDDT QVICQALVGE AHRAGSQDNA SALLVQVEQL PEAALADTLA
QLEHWPPPPR LRDGQEFEGW QVERLLGESR QSLIYRVRDT DNQPWLLKTL PASRAGEEQA
GPALLQEEWF LRRVAGRHFP ELHALPQRQH LYYVQREYAG QTLAARLQQH GPLSLADWQD
LAPRLIKALG LLHRRNIIHR DIKPENLLLG DDGELRVLDF GLAYCPGLTR DEAHALPGTP
SYIAPEAFAG SPPSAQQDLY AAGVTLYHLL TGHYPYGEVE AFQHPRFGQP PPASRYRPDL
PAWLDEVLNR AVAAAPAQRF ETAEEWLLAL ESGERQSLNN RPRPLLEREP LLVWRTVALV
SLLLNLLLAL LLLK