| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2092 |
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| Symbol | |
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| ID | 5109826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2317888 |
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| End bp | 2318871 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640503336 |
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| Product | OmpF family protein |
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| Protein accession | YP_001187585 |
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| Protein GI | 146307120 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0207533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0999951 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTAA AAAACACCTT GGGCGTAGTC ATTGGCTCTC TCGTTGCCGC TACTTCCTTC
GGCGCGCTGG CACAAGGCCA AGGCGCTGTC GAGGTGGAGG GTTTCGTCAA TCGCTACTTC
GCCGACTCTC AGCGTGACTT CGCGCACGAT GAAGGCAACC TGTTCGGCGG CAGCATTGGC
TATTACCTGA CCGACGATGT AGAGCTGGCG CTGTCCTACG GCGAGTACCA CGATATTCGT
GGCACTGGCG CTCTCGGCAG CAAGAACATC AAAGGCAACC TGACCGACCT GAAGGCCATC
TACCACTTCG GTCAGCCGGG TGTAGGTCTG CGTCCTTACG TCTCCGCAGG TTTCGGCCAC
CAGAGCATCG GCGACGCCAA CAGCGGCGGC CGTAACCACT CGACTCTGGC CATCGCAGGC
GCTGGCGCCA AGTACTACTT CACCGAGATG TTCTACGCCC GTGCCGGCGT CGACGCTCTG
TACAACATCG ACCAGGGCGA CACCGAGTGG CAAGCCGGTG TGGGTGTTGG TCTGAACTTC
GGTGGCGGCA GCAAGCCGGC CCCGGCTCCG GCTCCTGTAG CTGCAGCTCC GGAGCCGATG
CCTGAGCCTG CTCCTGAGCC GGCCATGGAA ACCGTTCGCG TCGAGCTGGA CGTCAAGTTC
GACTTCGACA AAGACCGCGT CAAAGAAGAA AGCTACGGCG ACATCAAGAA CCTGGCTGAC
TTCATGAACC AGTACCCGCA GACCACTACC ACCGTTGAAG GTCACACCGA CTCCGTCGGT
TCTGACGCTT ACAACCAGGG TCTGTCCGAG CGTCGTGCCA ACGCCGTACG TAACGTGCTG
GTCAACCAGT ACGGTGTCGA TGGCAACCGC GTGAACGCTG TTGGTTACGG CGAAACCCGC
CCGGTAGCCG ACAACGCCAC CGACTCCGGC CGCGCCATCA ACCGTCGCGT TGAAGCCGAA
GTAGAAGCCC AGATCAAGCA GTAA
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| Protein sequence | MKVKNTLGVV IGSLVAATSF GALAQGQGAV EVEGFVNRYF ADSQRDFAHD EGNLFGGSIG
YYLTDDVELA LSYGEYHDIR GTGALGSKNI KGNLTDLKAI YHFGQPGVGL RPYVSAGFGH
QSIGDANSGG RNHSTLAIAG AGAKYYFTEM FYARAGVDAL YNIDQGDTEW QAGVGVGLNF
GGGSKPAPAP APVAAAPEPM PEPAPEPAME TVRVELDVKF DFDKDRVKEE SYGDIKNLAD
FMNQYPQTTT TVEGHTDSVG SDAYNQGLSE RRANAVRNVL VNQYGVDGNR VNAVGYGETR
PVADNATDSG RAINRRVEAE VEAQIKQ
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