| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2028 |
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| Symbol | |
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| ID | 5109919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2239749 |
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| End bp | 2241704 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640503269 |
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| Product | acetoacetyl-CoA synthetase |
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| Protein accession | YP_001187521 |
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| Protein GI | 146307056 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR01217] acetoacetyl-CoA synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.720983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.488067 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGC CCCTCTGGAC GCCCTCCGCC GAGCGTATCG CCGCCACCCG CCTGGATGCC
TTCCGCCGCC TGATCAACAG GCGCCACGGC CTCGACCTGG CCGACTACCC GGCCCTGCAC
GCCTGGAGCG TCGAACAGCG CGAAGCCTTC TGGCAGGCCA TCGTCGATTT TTTCGAGATC
CGCCTCAGCA CGCCCGCCGA GCGGGTACTG CGCGAGGGCC CGGCCATGCC CGACGCCGAC
TGGTTCCCCG GCGCCCGGCT GAATTTTGCC GAACACCTGC TGCGCCGCCG CGACCCGCAT
CCGGCGCTGG TGGCCGTGGG CGAAGACGGC AGCCGCGAGC AGCTCAGCTA CCTGGAACTG
GCCGGGCATG TCGCCGGCCT GCAGCGTAGC CTGCGCGAGG CCGGCGTGGG CGTCGGCGAC
CGGGTCGCGG CCTTTATGCC CAACACCTGG CAGACCGTGG TCGGCATGCT CGCCGCCACC
AGCCTCGGCG CCACCTGGTC GTCCTGTTCG CCGGACTTCG GCACCCAGGG GGTGATCGAC
CGCTTCGGCC AGATCGAGCC CAAGGTGCTG ATCGCCGCTG CCGGATACCG TTACGCCGGC
AAGAACCTGG ACCTGACCGC CAAGCTGGGT GAGATCCTCG AACGCCTGCC GAGCCTGGAG
CAACTCGTCG TCGTGCCCTA CTCCCGGCCC GAGGCGAAGC CCGCCGACTT CATCACCCAG
GCCCGCGTGG CGCTATGGCA AGACTTCTAC CAGCCCGGCG GCGAGCCCGA ATTCACTGCC
GTGCCCTTCG ATCAGCCGCT ATACATCCTC TACTCCAGCG GCACCACCGG CGTGCCCAAG
TGCATCGTCC ACGGCGTTGG CGGCACCCTG CTGCAGCACG TCAAGGAACT CGGCCTGCAC
ACCGACCTGA CGGCCGATGA CTGCCTGTTC TACTACACCA CCTGCGGCTG GATGATGTGG
AACTGGCTGG TCTCCGGCCT GGCCCTGGGG GCCACCCTGG TGCTGTTCGA CGGCTCGCCC
TTCCATCCGG GGCCCGAACG CCTGATCGAT CTGATCGACG CCGAGGGCAT CAGCATCTTC
GGCACCAGCG CCAAGTACCT CGCCGCGCTG GAAAAGGCCG GCGCCAAGCC GTGCGAAACG
CACAAATTGC AACGCCTGAA AGCGCTTCTC TCCACCGGTT CGCCACTGGC CCACGAGAGC
TTCGACTTCG TCTACCAGGG CATCAAGGCC GATCTGTGCC TGTCGTCCAT CTCCGGCGGC
ACCGATATCG TCTCCTGCTT CACCCTCGGC AACCCGGTGC TGCCGGTGTG GCGCGGCGAG
CTGCAGTGCA AGGGCCTGGG CATGGACGTG CAGGTATGGA ACGACAGTGG CCAGCCGGTG
ACCGGCGAGA AAGGCGAACT GGTCTGCGCC CGGCACTTTC CCTCGATGCC GCTGGGCTTC
TGGAACGACG AAGGCGGCGA GAAATTCCGC GCCGCCTATT TCGACACCTT CCCCGGCGTC
TGGGCCCATG GCGACTACGC CGAGGAAACC GTGCACGGCG GCCTGGTGAT CCACGGCCGC
TCCGACGCGG TGCTGAATCC GGGCGGCGTG CGCATCGGTA CCGCGGAGAT CTACCGCCAG
GTGGAAAAGG TACCGCAGGT GCTGGAATCC CTCGCCATCG GCCAGGACTG GGCTGGCGAC
GTGCGCGTGG TGCTGTTCGT CCGCCTGCGC GAGGGCGTGG TGCTGGACGA GGCGCTGGAA
CGCAAGATCC GCCAGGTGAT CCGCGCCAAC ACCACCGCCC GTCACGTGCC GGCGAAGATC
GTCGCGGTGG CCGATATCCC ACGTACCATC AGCGGCAAGC TGGTGGAACT GGCGGTGCGC
AACGTGGTGC ATGGCCGCCC GGTGAAGAAC ACCGACGCCC TGGCCAACCC GCAGGCGCTG
GAGCTGTTCA GGGATCTGCC GCAACTGCGT GAGTGA
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| Protein sequence | MQQPLWTPSA ERIAATRLDA FRRLINRRHG LDLADYPALH AWSVEQREAF WQAIVDFFEI
RLSTPAERVL REGPAMPDAD WFPGARLNFA EHLLRRRDPH PALVAVGEDG SREQLSYLEL
AGHVAGLQRS LREAGVGVGD RVAAFMPNTW QTVVGMLAAT SLGATWSSCS PDFGTQGVID
RFGQIEPKVL IAAAGYRYAG KNLDLTAKLG EILERLPSLE QLVVVPYSRP EAKPADFITQ
ARVALWQDFY QPGGEPEFTA VPFDQPLYIL YSSGTTGVPK CIVHGVGGTL LQHVKELGLH
TDLTADDCLF YYTTCGWMMW NWLVSGLALG ATLVLFDGSP FHPGPERLID LIDAEGISIF
GTSAKYLAAL EKAGAKPCET HKLQRLKALL STGSPLAHES FDFVYQGIKA DLCLSSISGG
TDIVSCFTLG NPVLPVWRGE LQCKGLGMDV QVWNDSGQPV TGEKGELVCA RHFPSMPLGF
WNDEGGEKFR AAYFDTFPGV WAHGDYAEET VHGGLVIHGR SDAVLNPGGV RIGTAEIYRQ
VEKVPQVLES LAIGQDWAGD VRVVLFVRLR EGVVLDEALE RKIRQVIRAN TTARHVPAKI
VAVADIPRTI SGKLVELAVR NVVHGRPVKN TDALANPQAL ELFRDLPQLR E
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