| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2019 |
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| Symbol | |
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| ID | 5109910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2228352 |
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| End bp | 2229884 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640503260 |
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| Product | NADH dehydrogenase subunit L |
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| Protein accession | YP_001187512 |
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| Protein GI | 146307047 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.202632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0936538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACCCG TTCTTACTGA ATTGGCCAGC CTGCTGCCCT GGGTGTACGC CGTGGCCTTG
GTGCCGGCGG CACTGGTCGC GGCCGGTCGC ACCGGCGCTC TGTGGCGGCC CGCCCGACTG
GCCGGCTACG CAGGTTTCGC CCTGGCCCTG GCCGCGCTGC TGCAAGCGGC GCTGGACAGT
CTGGAAAACG ATCGCCTGGG CCTGGCCATG ACCACGCTGG TCAGCCTGCT GGCGCTGGTC
ATCATCGAGT TTTCCCACCG CTATCTGGAC GGCGAGCCGG GCCAGCGCCG TTACGTACTG
GCCTTGCTCG GCACCCTGGC ATCGGTCGCG CTGGTGGTGA CCAGCGGCGA TCTGTACCTG
CTGGTCGGTG CATGGATCGT TTCGAGCCTG TGCCTGCATC AGCTGCTGAC CTTTTACCGC
GACCGGCCGA TGGCGCAGGT GGTGGCGCAC AAGAAGTTTC TTGCCAGCCG CCTGGCCGAT
CTCTGTCTGC TGCTGGCGAC CGTGCTGCTG GTGCGAGCCG CCGGCGGCAG CGAGATCGCG
CTGATTCTCG AGCAGGTCGC CGCGCGCCAG GACAGTGGTG GCGCGCTGGG CTGGGATCTG
CAGCTGGCCG CCATGTTGCT GGCGCTGGCG GTGATACTGA AATCCGCACA GCTGCCTGTG
CACGGCTGGC TGATACAGGT GATGGAGGCC CCCACGCCGG TGTCGGCGTT GCTGCATGCC
GGCCTGGTCA ATCTGGGCGG CTTTCTCCTG CTGCGCTTCG CACCCTTGCT CTCGGCGGCG
CCGGCTGCGC AGACGCTGCT GGTCGTGGTC GGCGGACTGA CCGCGGTGCT GGCGGCCCTG
GTGATGATGA CGCGCATCAG CATCAAGGTA CGTCTGGCCT GGTCCACCTG TGCGCAGATG
GGCTTCATGC TGCTCGAGTG CGGGCTGGGC CTCTACGAAC TGGCACTGGT GCATCTGCTG
GCGCACTCGC TGTACAAGGC GCACGTCTTC CTCGCCTCTG GTGAAACGGT GCTGCAGGCG
CGCCACCAGG CGCTGCAGGC ACGGCGCCCG GCGCCGCGTC TTCGCTCGCT GCTGCTGGCG
CTAGGACTAG CCGGCCTGGG TATCACGCTG CTTCACCAGC TCTGGCTGCA CTGGCTGCCG
ACGCATCCGC TGCCGCTGGA AGCGCTGGCC ATCGTCGCCG TCGGGCTGGC GCCCTGGTGC
CTGCATCGCG GCGGTCTGGC CCATGGGCTG ACGATGCTGA TCCTGCTGCT CGGCCTGTAT
CTGCTGTGGC ACCTGGGAGC CGCCTGGATA CTGGGCGCCG ACGCCACATC CGGGGCGCAT
TCGCTCTACC TGACGCTGCT GGCGCTCGGG CTGTTCGCCG CGCTGTACCT GGTGCAGGCA
TGCATCGTCG CCAGGCCCGA GGGCGTCCTG GCGCGGCGCC TGTACCCGGT AGCCTTCGCC
GGATTCTTCC TTGACGAACA CTTCACCCGC CTGACCTTCC GCCTGTGGCC GCCACGCCGG
CCGGGCCTGC CCGTGAACGG AGAACGCTCA TGA
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| Protein sequence | MPPVLTELAS LLPWVYAVAL VPAALVAAGR TGALWRPARL AGYAGFALAL AALLQAALDS
LENDRLGLAM TTLVSLLALV IIEFSHRYLD GEPGQRRYVL ALLGTLASVA LVVTSGDLYL
LVGAWIVSSL CLHQLLTFYR DRPMAQVVAH KKFLASRLAD LCLLLATVLL VRAAGGSEIA
LILEQVAARQ DSGGALGWDL QLAAMLLALA VILKSAQLPV HGWLIQVMEA PTPVSALLHA
GLVNLGGFLL LRFAPLLSAA PAAQTLLVVV GGLTAVLAAL VMMTRISIKV RLAWSTCAQM
GFMLLECGLG LYELALVHLL AHSLYKAHVF LASGETVLQA RHQALQARRP APRLRSLLLA
LGLAGLGITL LHQLWLHWLP THPLPLEALA IVAVGLAPWC LHRGGLAHGL TMLILLLGLY
LLWHLGAAWI LGADATSGAH SLYLTLLALG LFAALYLVQA CIVARPEGVL ARRLYPVAFA
GFFLDEHFTR LTFRLWPPRR PGLPVNGERS
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