| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2014 |
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| Symbol | |
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| ID | 5109905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2224193 |
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| End bp | 2225062 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640503255 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001187507 |
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| Protein GI | 146307042 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0382671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.0477069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACCG AATTGCGCAC CCTGATCGCC GTCGCCCGTT ATGGCACCTT CAGTGCGGCG
GGCGACCGGG TCGGCCTGAC CCAGGCCGCG GTCAGCGGCC ATATGCGCCG TCTCGAGGAC
ACCCTGGGCT TCGCCCTGTT CGATCGCACG GGGCGCTCGG CCACGCTGAA TGCCGCCGGG
CTGCGCACCC TGGCGCGCGC CGAGGCGCTG GTGGCCGCCT TCGATGCGCT CGGCGAGCCG
ACCCAGGACG AGGAGTGGGC CCAGCCCCTG GAGATCGGTG CGATCGCCTC GGTACAGGCG
ACCCTCCTGA CCCGCGCACT GGTGCCTTTC CGGCAGCGTT TCGCCAATGC GCGGGTGAAC
CTCCTGCCTG GGGTTTCCCT GCACCTGATG GACAGGGTGG AGGCAGGCGA ACTGGACCTG
GCCATTCTCA TCCGCCCGGC CTTCGAGCCG CCGCGTGAGC TGGCATGGAC GCCGCTGGTC
CGCGAGCGCT ACGCGCTGCT GGCGCCGGCG AGCGTGGCCG GCGAGGACTG GCGGGCGCTG
ATTTGCGAGC AGCCCTTCAT TCGCTACGAC CGTTCCTCGT TCGGTGGGCG GCAGGTGGAG
CGCTATCTGC GCGACAACTC CCTCGCGCCG CAGGAGTGGA TCGAGGTGGA CGATATCCCG
GCCATGCGCT CGATGGTGGA GAGCGGTCTC GGCGTGGCGG TGGTGCCGCT GACCGAAAGC
ATTCTGCCGC TCCCGGCCAG CGTTCGCGTC ATCGAGCTTG GCCCGCTGCC GATCCACCGG
GAAATCGGCG CGCTGTACCC CAGGGTCAGC CGCTCGGCGG CCGTGGCCGG CTTCATCGAG
TGCCTGCAGG GCGTGGGCGT GGCCCGCTGA
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| Protein sequence | MITELRTLIA VARYGTFSAA GDRVGLTQAA VSGHMRRLED TLGFALFDRT GRSATLNAAG
LRTLARAEAL VAAFDALGEP TQDEEWAQPL EIGAIASVQA TLLTRALVPF RQRFANARVN
LLPGVSLHLM DRVEAGELDL AILIRPAFEP PRELAWTPLV RERYALLAPA SVAGEDWRAL
ICEQPFIRYD RSSFGGRQVE RYLRDNSLAP QEWIEVDDIP AMRSMVESGL GVAVVPLTES
ILPLPASVRV IELGPLPIHR EIGALYPRVS RSAAVAGFIE CLQGVGVAR
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