| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2012 |
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| Symbol | |
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| ID | 5109903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2222617 |
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| End bp | 2223645 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640503253 |
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| Product | homoserine dehydrogenase |
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| Protein accession | YP_001187505 |
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| Protein GI | 146307040 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.148212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.080267 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACGC TCAAGGTGGC CATCGCCGGC TTCGGCGGCG TCGGTCGCGC CACGGCCGAG
CTGCTGCTGC AGCGCCGCGA CCGCTATCGC CAGGTCTACG GCGTGGACGT GCGCCTGGTC
GCGGTGTGTG GCTCGCGCGC CGGCCTGGCC GACGCCAACG GCCTGCAAGC CGGGCAGCTG
GCCGCGCTGC AGCCCGGTCT GACGGGGCCC GCGTTCATCG CGGCGAGCGG CGCGTCGGTG
CTCATCGAAG CCGGCCCCAG CGATTTTCGC AGCGGCGGGC CGGGCCTTGC CTACCTGCGC
GAGGCGCTGG CGGCCGGGCA GGACTGCATC GTCATAAGCA AAGGCGCACT GGTGCACAGC
GGCCCGCAGC TGCGCGAACT CGCGCGCACC TCGGGGGCCA TGCTGAAACT CAGCGGCGCC
GCGGCGGCGG CCCTGCCCAC GCTGGATCTG CTCCAGCACA GCCTGGCCGG CTGCCAGGTG
CTCGCCGTCG AGGGCATCCT CAACGCCACC ACCAACTACC TGCTCGATGC CATGCGCACC
CAGGGGCTCG GCTTCGACGC GGCGCTGCAT GAGGCGCAGG CCGGCGGCTT CGCCGAAGCG
GACACGCGCA ACGACACCGA AGGCTGGGAT ACCGCCTGCA AACTCCTGCT GCTGGCCAAC
TTCGGCCTGG GCGCCGATCT GACCATGGAA GATGTCGACG TCGAGGGCAT CCACGCGGTG
ACGGCGCAGC GTATCGACAG CTGGGCGAAG CAGGGGCTGG TGCCCAGGCT GGTCGGCCGT
CTCGAGCGGG TGAACGGCAC GCTGCGCGCC AGCGTCGGCA TCAAGACCTA CCCGCTGTCC
GACCCTTTCG CTCAGGTCAA TGGCAAGAAC AAGGCGATCC GCATCAGCAG CGATGCCATG
GGCGAAACCC TCGCCATCGG CTGCGGCGTC GAACCGCTCG CCACCGCGGC GGCCGCGCTC
AAGGACCTCG AACATATTCT CCAGGCCAGG GCCGCGCGCC CGGCCCTCTC TACGGACCAC
CCAGCATGA
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| Protein sequence | MQTLKVAIAG FGGVGRATAE LLLQRRDRYR QVYGVDVRLV AVCGSRAGLA DANGLQAGQL
AALQPGLTGP AFIAASGASV LIEAGPSDFR SGGPGLAYLR EALAAGQDCI VISKGALVHS
GPQLRELART SGAMLKLSGA AAAALPTLDL LQHSLAGCQV LAVEGILNAT TNYLLDAMRT
QGLGFDAALH EAQAGGFAEA DTRNDTEGWD TACKLLLLAN FGLGADLTME DVDVEGIHAV
TAQRIDSWAK QGLVPRLVGR LERVNGTLRA SVGIKTYPLS DPFAQVNGKN KAIRISSDAM
GETLAIGCGV EPLATAAAAL KDLEHILQAR AARPALSTDH PA
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