| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1960 |
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| Symbol | |
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| ID | 5109851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2156959 |
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| End bp | 2157708 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503194 |
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| Product | hypothetical protein |
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| Protein accession | YP_001187453 |
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| Protein GI | 146306988 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5501] Predicted secreted protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0696001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.328417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTGGC GTAGCCTGAT GTTGCTGGCC CTGTTTGCCT GGGCCTGGGA AGCGCGGGCG
GCCGCGCCCG ATCCGGTCGC TTCGGTAATG TGGGATTACT ACCACCAGCG TCTGCTGAGC
GGTGAGGCTT TCGTTTTCGA CGACAGGGTT CGCCTCGAGG TGCCACCATT CGCCGAGGAT
GCGCGCCAGG TGCCGATCCA GATCGATGCC AGCGCCTACC GCGGCAAGGT CAAACGTATT
CTGGCCTGGG CCGAACTCAA CCCCATCCCG CGTATTCTCG ATTTCACCCC CGGCGCCGAG
CTTGAGCCGA GCCTGGCCAT CCGTATCCGC GTCGAGCAGG CCACGCCGAT TCGTGCTGCG
GTGCTCACCG ACGATGGCGT CTGGCATATC GGCTCGGCTC GCGTCGAGGC GGCAGGCGGC
GGTTGCACCG CGCCCAGCGT GGTGCGTGCC GAGGCTGGCT GGGAAGAGCG CCTGGGCCAG
GTGCTGGGCA AGCGCTTCGT ACGCGGTGAG GACAGCCGCC TGCGCCTGCA GGTGTCGCAC
CCGATGGACA ACGGCCTGGT CGGCGGCATC CCCGAGTTCT ACATCGAGGA AGCCGAGCTG
CGCGATGCCG AGGGCCAGGT GCTGGGGCGT ATCGAATTGT TCCCGGCGGT CAGCGAGAAC
CCGACGCTGA CCTTCGATCT GCGGGGCGAT CAGCAGGCCG AAGTCTGGCT GCGCGACAAC
AACGGCAACG AATTCCAGGC CGCGTTCTGA
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| Protein sequence | MDWRSLMLLA LFAWAWEARA AAPDPVASVM WDYYHQRLLS GEAFVFDDRV RLEVPPFAED
ARQVPIQIDA SAYRGKVKRI LAWAELNPIP RILDFTPGAE LEPSLAIRIR VEQATPIRAA
VLTDDGVWHI GSARVEAAGG GCTAPSVVRA EAGWEERLGQ VLGKRFVRGE DSRLRLQVSH
PMDNGLVGGI PEFYIEEAEL RDAEGQVLGR IELFPAVSEN PTLTFDLRGD QQAEVWLRDN
NGNEFQAAF
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