| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1959 |
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| Symbol | |
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| ID | 5109850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2156065 |
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| End bp | 2156937 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640503193 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001187452 |
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| Protein GI | 146306987 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.369484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.268176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGGC TGATCCATCT GTGTGGCCTG CTGCTTTGCC TGGGCACAGC CCAGGCGCAG
GTGCGTGATT TCGACCGCAT CATCGAGTCG GGCACTCTGC GTGTGGCGCT GTACCAGAAC
TTCCCGCCCT ACAGTTACGA GGAGGGCGGT CAGCCGCGCG GTGTCGACTA CGAGCTGGCC
AAGGCACTGG CAGAAGGGCT TGGCCTCAAG CTGGAGCTGA TGTGGGCGCC GCCGGGTGAG
AAGCTAGACG ACGACCTGCG CGACTACATC TGGCGTGGCC GGGTGACCGC GCAGGGCCAG
CTGGCCGATG TGATGCTGCG CGTGCCTTAC GACCGTGACT ATGCACAGCT GCGCAACGAG
TTGGGCGAAC TGGTCAACGA GCGCGTGGTG ATGTTCGGCC CCTATCAGCG CGAGCGCTGG
CAGCTGGCCT TCGATCGTCG GCGCCTGCCC GAGGTGCCGA GCATCCATGC CTTGCGTCAG
CACCCGGTCG GGGTGGAGGT CGAGAGCGTG CCCTCGTTCT ACCTGAGTTC GGTGCACAGC
GGCATGCTCA GCCAGGAAAC CCGACACTAC CCGACGCCGA AGCAGGCATT TGCTGCCATG
CAGGGTGGTG AGGTGGATGC AGTGATGGCG CTGCGTGGCG AGGTGGACTG GCTGGTGCAC
GAGGCCAAGG ACCCGCAACT GGCGTTGGCC GAGAACGCCT ACCCGGACAT GGGCCGGCAG
ATCTGGGAAA TCGGCATGGC GGTCCACGAG ACCAATCGTC AGCTCGCCTA TGCCCTGGAA
GAACAGCTGG AAAGCCTGAT TCTCGATGGT TCGCTCGAGC GCCTGTACGC ACGCTACGGG
CTGCGCTTCG AGAGGCCTGA ACAATACCAA TAA
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| Protein sequence | MRRLIHLCGL LLCLGTAQAQ VRDFDRIIES GTLRVALYQN FPPYSYEEGG QPRGVDYELA
KALAEGLGLK LELMWAPPGE KLDDDLRDYI WRGRVTAQGQ LADVMLRVPY DRDYAQLRNE
LGELVNERVV MFGPYQRERW QLAFDRRRLP EVPSIHALRQ HPVGVEVESV PSFYLSSVHS
GMLSQETRHY PTPKQAFAAM QGGEVDAVMA LRGEVDWLVH EAKDPQLALA ENAYPDMGRQ
IWEIGMAVHE TNRQLAYALE EQLESLILDG SLERLYARYG LRFERPEQYQ
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