Gene Pmen_1955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1955 
Symbol 
ID5109846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2151911 
End bp2152339 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content64% 
IMG OID640503189 
Producthypothetical protein 
Protein accessionYP_001187448 
Protein GI146306983 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.220825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.605963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACTA CCACTGCAAC TCCACACGCC TACCCCAACA TTCTCAGCCC CTTGCACGCC 
ACCCTGCTGT GCGGCCAGGT GCCGCTGTTT CTCGGCGCCC TGATCGCCGA CATCGCCTAC
TACCGCAGCT ACCAGATTCA ATGGAGCAAC TTCGCCTCCT GGTTGATCGC CGGCGCCCTG
GTATTCGCCG GCCTGGCGCT GCTGTTCGCC CTGGTCGGGC TATTCCGTAG ACGCAACCCG
CGCCCGCTCA CCTACTTTTT GCTGCTCCTG GTTACCTGGG TGCTGGGTTT CATCAACGCG
CTGGAGCACG CCAAGGACGC CTGGGCCGTT ATGCCGATGG GCCTGGCCCT GTCGGTGATC
GTCACCCTGC TGGCCATCGC AGCCACCTGG GCAGGCATGG CCCAACCACG TACAGGAGAT
GCCCGATGA
 
Protein sequence
MTTTTATPHA YPNILSPLHA TLLCGQVPLF LGALIADIAY YRSYQIQWSN FASWLIAGAL 
VFAGLALLFA LVGLFRRRNP RPLTYFLLLL VTWVLGFINA LEHAKDAWAV MPMGLALSVI
VTLLAIAATW AGMAQPRTGD AR