Gene Pmen_1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1942 
Symbol 
ID5110069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2140639 
End bp2141058 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content65% 
IMG OID640503176 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001187435 
Protein GI146306970 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.631639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTATCC GCCCCTTCCA ACCCGCCGAT GAGGCTGCCG TCGTCGAGCT CTGGCAACGC 
TGCGACCTGA CCCGCCCCTG GAACGACCCG CACAAGGACA TTCAGCGCAA GCTCAAGGTG
CAACCCGAGC TGTTTCTGGT GGGGGAGATC GACGGCCAGC TGGTGGCCTC GGCGATGGCC
GGTTACGAAG GCCATCGTGG CTGGGTCAAC TACCTGGCGG TATGCCCGGA GCAGCGCCAG
CGGGGCCTGG CGCGCCAGCT GATGGCCCAT ATCGAAGAGC AGCTGCTGGC CATGGGCTGC
CCCAAGCTCA GCCTGCAGGT ACGCGACAGC AACACCGCAG CCTTGGCCTT CTACGAGCGG
CTCGGCTACA AGGTGGACGC TTCGGTAAGC CTGGGCAAGC GCCTGATTGC GGATGATTGA
 
Protein sequence
MLIRPFQPAD EAAVVELWQR CDLTRPWNDP HKDIQRKLKV QPELFLVGEI DGQLVASAMA 
GYEGHRGWVN YLAVCPEQRQ RGLARQLMAH IEEQLLAMGC PKLSLQVRDS NTAALAFYER
LGYKVDASVS LGKRLIADD