| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1930 |
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| Symbol | |
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| ID | 5110058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2122653 |
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| End bp | 2123147 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640503165 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_001187424 |
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| Protein GI | 146306959 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.109032 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCTG GGATGAGCCC CGGTCGCATC CAATTCGCCG AGCAGGACGG CACATTCGTC
CTGAAATTTG TCGGCGAAGT CCGTCTGACG CTGTGTTCGG CGCTGGATGC CACGATTGAG
AAGATTTTCA CCGCGTTGAA TTTTTCGGCC ATCGTCATCG ACCTGACCGA AACCCGCAGC
ATCGACAGCA CCACCCTGGG TCTGCTGGCC AAACTGTCCA TTCTTTCGCG GCAGAAGGTG
GGCCTGTTGC CGACCGTGGT GACCACGCAC GACGATATCA CCCGCCTGCT GCAGTCGATG
GGTTTCGATC AGGTGTTCAA TATCGTCGAT CGTCCGATTC CCTGCCCGGA AGCACTGGAC
GACCTGCCAT CGCAGGATCA GAACGAGGAA GTGGTCAAGG CCAAGGTGCT GGAAGCGCAC
CGTATCCTGA TGGGGTTGAA CGACTCCAAC CGCGAGGCCT TCCATGATCT GGTCAGTGCG
CTCGAGCGGC ACTGA
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| Protein sequence | MNPGMSPGRI QFAEQDGTFV LKFVGEVRLT LCSALDATIE KIFTALNFSA IVIDLTETRS
IDSTTLGLLA KLSILSRQKV GLLPTVVTTH DDITRLLQSM GFDQVFNIVD RPIPCPEALD
DLPSQDQNEE VVKAKVLEAH RILMGLNDSN REAFHDLVSA LERH
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