| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1927 |
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| Symbol | |
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| ID | 5110055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2120199 |
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| End bp | 2120903 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640503162 |
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| Product | VacJ family lipoprotein |
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| Protein accession | YP_001187421 |
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| Protein GI | 146306956 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.265642 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGTTA TCGGTGCTCG CTGGATCGTG CGCCTGGGGA GCCTGATGGC GCTGGTCGGC
CTCAGTCTGT TGCCGGTCAT GAGCCAGGCC GCTTCGGAAG AAGACCCCTG GGAGGGCTTC
AACCGCGCGA TGTTTCGCTT CAACGATACA CTCGATACTT ACGCGCTGAA ACCGATTGCG
CAGGGCTATC AGAAGGTCAC GCCGCAGTTT CTTGAAGACG GCGTGCACAA CGTCTTCGGC
AATATCGGCG ACGTCGGCAA CCTGACCAAC AACCTGCTGC AGGGCAAGCT GCACGATGCC
GGTGTCGATA CCGGTCGCCT GATCTTCAAC ACCACCTTCG GCCTGCTGGG CTTCTTCGAC
GTGGCCAAGC ATATGGGCCT GCAGAAGAGC GACGAGGATT TCGGCCAGAC CCTGGGCGTC
TGGGGCCTGA ACAGCGGGCC CTATCTGGTG ATCCCGTTCC TCGGTCCGAG CACCGTGCGC
GACGCCGCCG GCAGGGTGCC GGACAGCTTC GTGACGCCTT ATCCGTACAT CGACCACGTG
CCGACCCGCA ACGTCACCCG TGGCGTCGAG GTGGTGGATA CCCGCGCCAG CCTGTTGTCG
GCCGAACGCC TGATCAGCGG CGACAAGTAC ATCTTCATCC GCAACGCCTA CCTGCAGAAC
CGCGAGTTCA AGGTCAAAGA CGGTGACGTC GAAGACGATT TCTGA
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| Protein sequence | MHVIGARWIV RLGSLMALVG LSLLPVMSQA ASEEDPWEGF NRAMFRFNDT LDTYALKPIA
QGYQKVTPQF LEDGVHNVFG NIGDVGNLTN NLLQGKLHDA GVDTGRLIFN TTFGLLGFFD
VAKHMGLQKS DEDFGQTLGV WGLNSGPYLV IPFLGPSTVR DAAGRVPDSF VTPYPYIDHV
PTRNVTRGVE VVDTRASLLS AERLISGDKY IFIRNAYLQN REFKVKDGDV EDDF
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