| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1925 |
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| Symbol | |
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| ID | 5110053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2118900 |
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| End bp | 2119619 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640503160 |
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| Product | phosphatase/phosphohexomutase-like protein |
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| Protein accession | YP_001187419 |
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| Protein GI | 146306954 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.27121 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAACG CCTCCCCTAC CGCCATTCTT TTCGAGCTGT CCGGCTGCCT GGTCGACTTC
GGCGCCCGCA CCTTGCCGGT CGCACTGCAG CGGCTGCATC CCCAATGCAC TCGCACCGAT
ACCCTGGGCA GCCCGCAGCA GGCTCTCGCG GGCTGGCTGG GCCAAGCGCC GATGCCGACG
CAACAGCAGG CCTTGCAGCA GATGCTGAGC GAAGTAGCCG ACGAACACGC GGAGCTCACG
CCCGGCGCAG AACAGCTGCT GCACAGGCTG CACGCCGACG CCATTCCCTG CGCCTGGCTC
GACAGCCTGC CGGCAGACGC CAGCCTGCGT TTGGCCGAGG CACTGCCGGT ACCGGTCACG
GCTGTCCTGG CGCGCCAGGC CAGGCCCTGG CCCGCGCCTG ACGCCTGCTG GCAGGCCCTG
AGCCAACTGG GTGTGGAGCG TCTCGACGGC TGCGTTCTGG TCAGCGGCAA CCCGCACCTT
CTGCAGGCCG GCCTCAATGC CGGCTGCTGG ACCATCGGCC TGGCCGCCTG CGGCCCCCTG
TGCGGCCTCG CGCCGGCTGA CTGGCAGGCG CTGACGACGA ACGAGCAGGA GCGTCTGCGC
GCCGAAGCCA CGCTGCAGCT CTATCGCCTG GGGACGCACT CGGTGGTCGA TCATCTGGGT
GAGATCCAGG CCAGCCTCGA GGATGTTGGC ATGCGCCGGC TCAAGGGCGA AAAGCCCTGA
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| Protein sequence | MPNASPTAIL FELSGCLVDF GARTLPVALQ RLHPQCTRTD TLGSPQQALA GWLGQAPMPT
QQQALQQMLS EVADEHAELT PGAEQLLHRL HADAIPCAWL DSLPADASLR LAEALPVPVT
AVLARQARPW PAPDACWQAL SQLGVERLDG CVLVSGNPHL LQAGLNAGCW TIGLAACGPL
CGLAPADWQA LTTNEQERLR AEATLQLYRL GTHSVVDHLG EIQASLEDVG MRRLKGEKP
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