Gene Pmen_1898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1898 
Symbol 
ID5110026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2087573 
End bp2087935 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content61% 
IMG OID640503129 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001187392 
Protein GI146306927 
COG category[R] General function prediction only 
COG ID[COG3324] Predicted enzyme related to lactoylglutathione lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.118607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.864819 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCAC ACGAGAAGAT CAACTACGTC GAATATCCCT CCCGCGATCT GCCGGCAACC 
AAGGCCTTCT TCCAGGCCGC TTTCGGCTGG CGGTTCACGG ACTACGGCCC CGATTATGCC
GCCTTCGCCG ACGAAGGCCT GGATGGTGGT TTCTTCAGTG CCGAGATGTC CGCGCGTAGC
GACAACGGCA GCGCGCTGAT CGTGTTCTAC AGTGCACAGC TGGAAGACAC CCTGGCCAAG
GTCGAGGCTG CCGGTGAGGA AATCGTCAAA CCGATCTTTT CCTTCCCTGG CGGCAGACGC
TTTCACTTCG TCGAGCCGGG CGGCAACGAG TTTGCCGTAT GGTCGGAGCC GGACGGTCAG
TAG
 
Protein sequence
MPAHEKINYV EYPSRDLPAT KAFFQAAFGW RFTDYGPDYA AFADEGLDGG FFSAEMSARS 
DNGSALIVFY SAQLEDTLAK VEAAGEEIVK PIFSFPGGRR FHFVEPGGNE FAVWSEPDGQ