| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1886 |
|---|
| Symbol | |
|---|
| ID | 5110015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 2077517 |
|---|
| End bp | 2078110 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640503118 |
|---|
| Product | putative phosphohistidine phosphatase, SixA |
|---|
| Protein accession | YP_001187381 |
|---|
| Protein GI | 146306916 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.677546 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGGCGCTG ATGGGGCCGC GCGGCAACGT CCGAGTCTGA TCCTGTGCCT GCTGGCGCTG
CTGCTGGTCC CGCTCTGGGC CCTGGCGGCA GAGCAGGAGG AGCAGGCCTG GCAGGCGTTG
CGCGAGGGAC GCGCGCTGCT CATCCTGCGT CATGCCACGG CGCCGGGCAC TGGCGATCCC
GCCCATTTCC AGCTGGGCAA CTGCAGCACG CAGCGCAATC TGAACCAGCA GGGGCGTGAA
GAGGCAAGGC GCTGGGGCAC GCTGTTGCGC AGCCAGGGCA TCGGGCGGCC ACGCCTGTTC
AGCAGTCGCT GGTGCCGGGC GCTGGATACC GCGCGGGAGA TGGGACTGGG CACGGTACAA
CCGCTGCCGG CACTGGATTC CTTCTTCGCG CTACCCGGCG ATGGCAGCGA GCAGACGTCG
CAACTGATCC GCAGCATCAA CCTTATGCCG CCCGGAGAAC CACTGGTGCT GGTGTCTCAT
CAGGTCAATA TCACGGCCCT GACGCGCATC TTTCCGGCTT CCGGCGAAGG CTTGATCCTG
GCTTTGCCGC TGCGCGCGGC GCCGCAGGTG CTGGCACGTA TCGCGCCGCC TTGA
|
|---|
| Protein sequence | MGADGAARQR PSLILCLLAL LLVPLWALAA EQEEQAWQAL REGRALLILR HATAPGTGDP
AHFQLGNCST QRNLNQQGRE EARRWGTLLR SQGIGRPRLF SSRWCRALDT AREMGLGTVQ
PLPALDSFFA LPGDGSEQTS QLIRSINLMP PGEPLVLVSH QVNITALTRI FPASGEGLIL
ALPLRAAPQV LARIAPP
|
|---|
| |