| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1863 |
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| Symbol | |
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| ID | 5109993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2054197 |
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| End bp | 2055438 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640503095 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001187359 |
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| Protein GI | 146306894 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0564121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGTCTA TCGGTGATTT CAACCGGAGT TTTATCGCAT TGGCATCGGG AACCTTGGTT
GCCCAAGCGA TACCGATTGC AATAAGCCCT CTGCTTACCC GCCTTTTTTC TCCTGAACAG
CTCGGTGGGT TCGCACTGTT TATGGCTCTT GTTACTGTGC TGGGTGGCAT AGCTGCGGCG
CGCTATGAAA TGGCCATAAT GCTCCCGGAA AGTCAGCGGG ACGCCGAGAT GCTGGCATGG
TTGAGCGGCG CGGTGGCGTC GTTGTTCTCG CTTTTGTTGT TTATTCTATG CCTGCTCTGT
GGGGCAGAGA TTGCAAATCT TCTTAGAGCT CCGACACTTG TAGGCGTGTT ACCGTGGTTA
CCACTGGTTG TTTGGTTGTT GACTCTCGGG GCAATATTTT CAGCCCTTGC CTCCAGATCC
AGGCACTTCT CCAGTGTTGC TCGTGCGAAT GTACTTAAGT CAGTGGGCGT GAGCGGTACT
CAAGTGGGAG CCGGTTTTGC GAACTTGGGC GTGACGGGAT TAATCGCTGG CAATCTGCTG
GGGGCAGTAG TCTTCATTGG AGGGCTATGT CGATCCGTGA ACGGTCGGCG TGATGGCGCT
CGACCTACGC GTAGTGAGCT TGCAAGGCTA GCTTCCCGCT ACAAGGACTT CCCTAAGTAC
TCGCTTTGGG CAACTTTGGC CAATGGCATA TCGGTCAATG TGCTTAGCTT CCTGTTATCG
ACTTTTTATT CATTGGCCGC GCTGGGTTTC TACAATCTTG TGCAGCGCGT CTTGGCAGCG
CCTTCTGCGG TGCTGGGGAG TGCGATAGGA CAGGTGTTCT ACCAGCGGGC TAGTGTGGAG
CTCCGCGAGA AAGGCAACAT GCGGCAGTCG TTTCGTGAAG CGTGGTTGCG TTTGCTGGCG
ATCTCGATTC CTCCATTCCT AATTATCTAT CTTTTTGCCG AGCCTTTTTT TGCCTGGGTC
TTCGGCGAGA GTTGGAGGCT GGCGGGTACC TATGCGGAAA TCCTGGCGCC GCTGTTCTGG
ATCAGGTTCT GGGTTTCTCC GTTGAGCTCG ACTAATCAGA TTCTGCAGAA CAACTGGGTT
GGGCTTGTGG CTAATCTGGT TCTGCTGGCA TTGTCGTTTA TGGTCGTCGT GATCTCCTCT
TGGAATTCCC TGAGCGTTGA GTCAATGCTC GGTTGGATGA GCTGCGTGCT TTCGGTCTTT
TACCTGGTTT TTTTTGCGGT TCTTTATGCA AGTGCTCGTT GA
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| Protein sequence | MKSIGDFNRS FIALASGTLV AQAIPIAISP LLTRLFSPEQ LGGFALFMAL VTVLGGIAAA
RYEMAIMLPE SQRDAEMLAW LSGAVASLFS LLLFILCLLC GAEIANLLRA PTLVGVLPWL
PLVVWLLTLG AIFSALASRS RHFSSVARAN VLKSVGVSGT QVGAGFANLG VTGLIAGNLL
GAVVFIGGLC RSVNGRRDGA RPTRSELARL ASRYKDFPKY SLWATLANGI SVNVLSFLLS
TFYSLAALGF YNLVQRVLAA PSAVLGSAIG QVFYQRASVE LREKGNMRQS FREAWLRLLA
ISIPPFLIIY LFAEPFFAWV FGESWRLAGT YAEILAPLFW IRFWVSPLSS TNQILQNNWV
GLVANLVLLA LSFMVVVISS WNSLSVESML GWMSCVLSVF YLVFFAVLYA SAR
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