| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1856 |
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| Symbol | |
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| ID | 5109986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2046242 |
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| End bp | 2047708 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640503088 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001187352 |
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| Protein GI | 146306887 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.510486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGTACC CCAATGTCAT TCACCACGGC GCCGTCACTG GCGTGACAGG TTCTTGCCAT
CAATTGCAGA TGGACGAGCG CCATGGGCTC CTGGTCGATT GCGGTCTTTT CCAAGGGGCT
GAAACCTCTC CGGAGGGGCG AGCGGGTTCT GAGCGATTAG CAATCGATTT TTCCTTGGCT
GGCATAAAGG CTCTGGTCGC GACTCATGTC CATATCGACC ACGTTGGTCG CATTCCCTAT
TTGTTAGCGG CTGGCTTCAA AGGCCCGATT CTCTGCAGCG AACCGTCGGC CAAGTTGTTA
CCCATCGTCC TCAAGGATGC CTTCAAGCTT GGTTTCAGCC GCGACCAGAA ACAAGTCGAG
CGCTACCTCA AACTGATCGA GCAGCGCATC GTCGCCTTGC CGTACAAGCA GTGGTTCAAC
CTGATCGACA CGCCGCAGCT CAGCGCTCGC ATTCGTCTAC AGCGCGCTGG TCACATCCTC
GGCTCGGCCT ACGTCGAAGT GGATCTGCAA TATCCCAAGA CAAGGGAGAA AAAACGCATC
GTATTTTCCG GCGACCTGGG TGCACCACAT GCGCCGATCC TGCCTGCAAC GAAAGCGCCC
TACAAAGCCG ATATTCTGGT CATCGAAAGC ACCTATGGCG ACCGCTTGCA CGAAGATCGC
CACAGTCGTC GTGCACGTCT GGAAAAGGTG CTCGAGCATG CGCTGAGCAA CCAGGGCACG
GTTCTGATCC CGGCCTTCAG CATTGGTCGC ACTCAGGAGC TGCTCTACGA GCTTGAGGAC
ATCATTCACC TTAGAGCGTT GAGGGAGTCG GCAAAGACTC AGCCAGGTTC CTCCAGTTCG
AAAACAAGCA AAGCTTCGGT GCCCGACTGG GCAAACTTGC CGATTATTCT CGACTCTCCG
CTGGCCAGCC GCTTCACTTC GGTTTATCGC GAGCTTGACC AGTTTTGGGA TGCAGAGGCG
AGGGCGCGCT TGACCAAAGG CCGTAACCCA CTGGCTTTCC GTAACCTGCT AACGGTCGAT
AGCCACCAGG CCCACCTGGC TATGGTCAAC CGCCTGACGC AAACCGCTCA GCCGGCTATC
GTTATCGCTG GCAACGGCAT GTGCTCCAGT GGGCGCGTCG TCAACTACCT CAAAGCCATG
CTGGGTGATG AGCGGCATGA TGTGCTCTTT GTCGGCTACC AGGCTGAAGG TACGCCTGGG
AGACAGATCC AGCGTTTTGG CCCGCGTAGC GGCTATGTGG AATTTGACGG GCAGCGCTAT
GACATTCGGG CTCAGGTGCA TACCATAGGT CGTTATTCTG CCCATGCAGA TCAGGTGGGT
CTGGTTAGCT TTGTTACCCG AATGACGCAA TGGCCGTCAG AGGTCCGTGT CGTGCATGGC
GAGCTTGAAG CAAAGCAGCA ATTTGCAACG GTTCTGCATC AGCGCTACAA CGCGACTGAC
AGAGCTTTAA AAATAGTAAT TCCGTGA
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| Protein sequence | MRYPNVIHHG AVTGVTGSCH QLQMDERHGL LVDCGLFQGA ETSPEGRAGS ERLAIDFSLA
GIKALVATHV HIDHVGRIPY LLAAGFKGPI LCSEPSAKLL PIVLKDAFKL GFSRDQKQVE
RYLKLIEQRI VALPYKQWFN LIDTPQLSAR IRLQRAGHIL GSAYVEVDLQ YPKTREKKRI
VFSGDLGAPH APILPATKAP YKADILVIES TYGDRLHEDR HSRRARLEKV LEHALSNQGT
VLIPAFSIGR TQELLYELED IIHLRALRES AKTQPGSSSS KTSKASVPDW ANLPIILDSP
LASRFTSVYR ELDQFWDAEA RARLTKGRNP LAFRNLLTVD SHQAHLAMVN RLTQTAQPAI
VIAGNGMCSS GRVVNYLKAM LGDERHDVLF VGYQAEGTPG RQIQRFGPRS GYVEFDGQRY
DIRAQVHTIG RYSAHADQVG LVSFVTRMTQ WPSEVRVVHG ELEAKQQFAT VLHQRYNATD
RALKIVIP
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