| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1781 |
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| Symbol | |
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| ID | 5109361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1953667 |
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| End bp | 1955703 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503013 |
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| Product | oligopeptidase B |
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| Protein accession | YP_001187277 |
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| Protein GI | 146306812 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1770] Protease II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCTG CCCCCATCGC CCGCCGGGAA ACCGGAACCG ATCCCTATCG CTGGCTGGAA
CAGCGCGACA GCGAAGAAGT CCTCGACCAT CTCAAGGCCG AAAACGCCTA CCTCGAAGCC
GAGCTGGCGC CACAGCAGGC CCTGCGCGAA AGCCTGTTCG ACGAGATCAA GGCCCGCATC
CGCGAAACCG ATCTGTCGCT GCCCACGCCC TGGGGCGATT ACCTCTATTA CCAGCGCACC
ACGGCCGGCG ATGAGTACCC CCGCCACTAT CGCTGCAAAC GTCCGGTGGA CGGCTCGCTG
ACCGTCGACA CAGACAGCGA GACGCTGCTG CTCGACCCCA ACGCACTGGC CGGCGGCGGC
TTTCTCTCCG TCGGTGCGTT CAGCATCAGC CCGGACCAGC GGCGCCTGGC CTACAGCCTC
GACAGCAGTG GCGAGGAGAT CTACCGCCTG TTCGTCAAGG AGCTGGACAG CGGCCGGATC
AGCGAACTGC CCTTCGACGA CTGCGATGGC AGCATGACCT GGGCGGGCGA CAGCCAGACG
CTGTTCTTCA CCGAACTGGA CGACACCCAC CGCCCCTACA AGCTCTATCG CCATCGTCTC
GGTACCAGCG GCGCCGAACA GGTTTTCGAG GAGGCCGACG GCCGCTTCTT CCTGCATTGC
TACCGCTCCA GCTCCGAGCG CCAGCTGATC CTGCAGCTGG GCAGCAAGAC CACCAGCGAA
GTCTGGGTGC TCGATGCCGA ACGACCGGAG GGAGATTTCG TCTGCCTGGC CCCCCGCGAG
GAAGGCCATG AATACGACGC CGACCACGGC ATGCTCGACG GCCAGTGGTG CTGGCTGATC
CGCAGCAACC AGAGCGGCAT CAACTTCGCG CTGTATCGCG CGGACGAAGC CAAGCCGCAG
CGCCCGCACT GGCAGCAGAT TCGCGCGCAC GACCCGCAGG TGATGCTCGA CGGCGCCACC
CTCAACCAGC GCGCCATCGT CTTGGCCCTG CGCGAAGGTG GCCTGCCGGT TCTCGAAGTG
CAGCCGCAGG GCCAGGCGGC CTATCGCGTG CAGCTGCCGG ACGCGGCCTA CAGCCTCTAC
GTGCAGGACA GCCTGGAGTT CCACAGCCCG GTGATTCGCC TGCGCTACGA GGCGCTGGCG
CGCCCCGCGC AGATCCGTCA GCTGGAGCTG GCCACGGGCG AACAGCAAGT GCTCAAGCAG
ACGCCGGTCG AAGGCCCGTT CGATGCCGAT GCTTACGAGA GCCGCCGCCT CTGGGCCAAC
GCCGCCGACG GCACGCAGAT ACCGATCAGC CTGGTGGCAC GTCGCGACGT GCTCGCGGCC
GGCCAGCCGG CACCGCTGTA CCTGTATGGC TATGGCGCCT ACGGCGCCAG CCTCGACCCC
TGGTTCTCCC ATGCCCGTCT GAGCCTGCTG GAGCGCGGTT TCGTCTTCGC CATCGCCCAT
GTGCGCGGCG GCGGCGAAAT GGGCGAAGCC TGGTACCGCG CCGGCAAGCT GGAGCACAAG
CGCAATAGCT TCGGCGACTT CATCGCCTGC GCCGAGCGCC TGATCGCCGA GGGCCTGACC
CGGCCGGCGC AACTGGTCAT CAGCGGCGGC AGCGCCGGCG GCCTGCTGAT CGGCGCCGTG
CTCAACGAGC GGCCGGAGCT GTTCGCCGCG GCCATTGCCG AGGTGCCGTT CGTCGATGTG
CTCAACACCA TGCTCAACCC CGACCTGCCG CTGACCGTCA CCGAGTACGA CGAATGGGGC
GACCCGAACC AGCCCGAGGT GCACGAACGC ATCAAGGCCT ACGCGCCCTA CGAGAACGTC
AGTGCCCAGG CCTACCCGGC CATTCTCGCC GTGGCCGGCT ACAACGACAG CCGGGTGCAG
TACTGGGAGG CGGCCAAGTG GGTGGCCAAG CTGCGCGCGC GCAAGACCGA CGACAACCTG
CTGCTGCTCA AGACCGACCT GGACGCCGGC CACGGTGGCA TGAGCGGGCG CTACCAGGGC
ATCAGGGACG TGGCGCTGGA GTACGCCTTC GTGCTGCGGG TACTGGGCAT GGTCTGA
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| Protein sequence | MSSAPIARRE TGTDPYRWLE QRDSEEVLDH LKAENAYLEA ELAPQQALRE SLFDEIKARI
RETDLSLPTP WGDYLYYQRT TAGDEYPRHY RCKRPVDGSL TVDTDSETLL LDPNALAGGG
FLSVGAFSIS PDQRRLAYSL DSSGEEIYRL FVKELDSGRI SELPFDDCDG SMTWAGDSQT
LFFTELDDTH RPYKLYRHRL GTSGAEQVFE EADGRFFLHC YRSSSERQLI LQLGSKTTSE
VWVLDAERPE GDFVCLAPRE EGHEYDADHG MLDGQWCWLI RSNQSGINFA LYRADEAKPQ
RPHWQQIRAH DPQVMLDGAT LNQRAIVLAL REGGLPVLEV QPQGQAAYRV QLPDAAYSLY
VQDSLEFHSP VIRLRYEALA RPAQIRQLEL ATGEQQVLKQ TPVEGPFDAD AYESRRLWAN
AADGTQIPIS LVARRDVLAA GQPAPLYLYG YGAYGASLDP WFSHARLSLL ERGFVFAIAH
VRGGGEMGEA WYRAGKLEHK RNSFGDFIAC AERLIAEGLT RPAQLVISGG SAGGLLIGAV
LNERPELFAA AIAEVPFVDV LNTMLNPDLP LTVTEYDEWG DPNQPEVHER IKAYAPYENV
SAQAYPAILA VAGYNDSRVQ YWEAAKWVAK LRARKTDDNL LLLKTDLDAG HGGMSGRYQG
IRDVALEYAF VLRVLGMV
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